Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 MAL31YBR298C 1845 nt8.19□□□□□ -1.1
MSH3P25336 VTS1YOR359W 1572 nt8.18□□□□□ -1.1
MSH3P25336 HNM1YGL077C 1692 nt8.18□□□□□ -1.1
MSH3P25336 RRP43YCR035C 1185 nt8.18□□□□□ -1.1
MSH3P25336 LSM12YHR121W 564 nt8.18□□□□□ -1.1
MSH3P25336 YPC1YBR183W 951 nt8.18□□□□□ -1.1
MSH3P25336 PCL10YGL134W 1302 nt8.18□□□□□ -1.1
MSH3P25336 EHD3YDR036C 1503 nt8.18□□□□□ -1.1
MSH3P25336 YJL043WYJL043W 774 nt8.17□□□□□ -1.1
MSH3P25336 YOR041CYOR041C 432 nt8.17□□□□□ -1.1
MSH3P25336 ELP4YPL101W 1371 nt8.17□□□□□ -1.1
MSH3P25336 DCR2YLR361C 1737 nt8.17□□□□□ -1.1
MSH3P25336 PRB1YEL060C 1908 nt8.17□□□□□ -1.1
MSH3P25336 MAK32YCR019W 1092 nt8.16□□□□□ -1.1
MSH3P25336 TPI1YDR050C 747 nt8.16□□□□□ -1.1
MSH3P25336 GAT1YFL021W 1533 nt8.16□□□□□ -1.1
MSH3P25336 YGR068W-AYGR068W-A 96 nt8.16□□□□□ -1.1
MSH3P25336 PSP2YML017W 1782 nt8.16□□□□□ -1.1
MSH3P25336 TAF4YMR005W 1167 nt8.16□□□□□ -1.1
MSH3P25336 SEC24YIL109C 2781 nt8.16□□□□□ -1.1
MSH3P25336 SPR1YOR190W 1338 nt8.15□□□□□ -1.1
MSH3P25336 TAD2YJL035C 753 nt8.15□□□□□ -1.1
MSH3P25336 YNL234WYNL234W 1281 nt8.15□□□□□ -1.1
MSH3P25336 INP54YOL065C 1155 nt8.15□□□□□ -1.1
MSH3P25336 PRE2YPR103W 864 nt8.15□□□□□ -1.1
MSH3P25336 AGP2YBR132C 1791 nt8.15□□□□□ -1.11
MSH3P25336 MPC1YGL080W 393 nt8.14□□□□□ -1.11
MSH3P25336 MGM101YJR144W 810 nt8.14□□□□□ -1.11
MSH3P25336 YML034C-AYML034C-A 399 nt8.14□□□□□ -1.11
MSH3P25336 GDH1YOR375C 1365 nt8.13□□□□□ -1.11
MSH3P25336 YER147C-AYER147C-A 411 nt8.13□□□□□ -1.11
MSH3P25336 RTC2YBR147W 891 nt8.13□□□□□ -1.11
MSH3P25336 BDS1YOL164W 1941 nt8.13□□□□□ -1.11
MSH3P25336 COS6YGR295C 1146 nt8.12□□□□□ -1.11
MSH3P25336 OPI1YHL020C 1215 nt8.12□□□□□ -1.11
MSH3P25336 YMR306C-AYMR306C-A 390 nt8.12□□□□□ -1.11
MSH3P25336 CDC23YHR166C 1881 nt8.12□□□□□ -1.11
MSH3P25336 SMC5YOL034W 3282 nt8.12□□□□□ -1.11
MSH3P25336 HSM3YBR272C 1443 nt8.12□□□□□ -1.11
MSH3P25336 PNS1YOR161C 1620 nt8.11□□□□□ -1.11
MSH3P25336 TOD6YBL054W 1578 nt8.11□□□□□ -1.11
MSH3P25336 CPT1YNL130C 1182 nt8.11□□□□□ -1.11
MSH3P25336 MRPL36YBR122C 534 nt8.11□□□□□ -1.11
MSH3P25336 ECM30YLR436C 3825 nt8.1□□□□□ -1.11
MSH3P25336 YJL045WYJL045W 1905 nt8.1□□□□□ -1.11
MSH3P25336 YGL260WYGL260W 231 nt8.1□□□□□ -1.11
MSH3P25336 MRP1YDR347W 966 nt8.09□□□□□ -1.11
MSH3P25336 NUP53YMR153W 1428 nt8.09□□□□□ -1.11
MSH3P25336 FLC2YAL053W 2352 nt8.08□□□□□ -1.12
MSH3P25336 PPZ2YDR436W 2133 nt8.08□□□□□ -1.12
MSH3P25336 NUP57YGR119C 1626 nt8.08□□□□□ -1.12
MSH3P25336 GRH1YDR517W 1119 nt8.08□□□□□ -1.12
MSH3P25336 HAC1YFL031W 717 nt8.08□□□□□ -1.12
MSH3P25336 GTS1YGL181W 1191 nt8.08□□□□□ -1.12
MSH3P25336 YAH1YPL252C 519 nt8.08□□□□□ -1.12
MSH3P25336 BUD20YLR074C 501 nt8.07□□□□□ -1.12
MSH3P25336 ADE1YAR015W 921 nt8.07□□□□□ -1.12
MSH3P25336 SPS1YDR523C 1473 nt8.06□□□□□ -1.12
MSH3P25336 AFG3YER017C 2286 nt8.06□□□□□ -1.12
MSH3P25336 PSA1YDL055C 1086 nt8.06□□□□□ -1.12
MSH3P25336 YNR001W-AYNR001W-A 219 nt8.06□□□□□ -1.12
MSH3P25336 RFS1YBR052C 633 nt8.06□□□□□ -1.12
MSH3P25336 ERV2YPR037C 591 nt8.06□□□□□ -1.12
MSH3P25336 RMD8YFR048W 1989 nt8.06□□□□□ -1.12
MSH3P25336 MSS51YLR203C 1311 nt8.05□□□□□ -1.12
MSH3P25336 YKL147CYKL147C 618 nt8.05□□□□□ -1.12
MSH3P25336 DSE3YOR264W 1293 nt8.05□□□□□ -1.12
MSH3P25336 SRF1YDL133W 1314 nt8.04□□□□□ -1.12
MSH3P25336 MIX17YMR002W 471 nt8.04□□□□□ -1.12
MSH3P25336 CTR1YPR124W 1221 nt8.04□□□□□ -1.12
MSH3P25336 YPT10YBR264C 600 nt8.04□□□□□ -1.12
MSH3P25336 YDR327WYDR327W 327 nt8.03□□□□□ -1.12
MSH3P25336 HRA1HRA1 564 nt8.03□□□□□ -1.12
MSH3P25336 ERG12YMR208W 1332 nt8.03□□□□□ -1.12
MSH3P25336 SUA5YGL169W 1281 nt8.02□□□□□ -1.13
MSH3P25336 LYS12YIL094C 1116 nt8.02□□□□□ -1.13
MSH3P25336 MEU1YLR017W 1014 nt8.02□□□□□ -1.13
MSH3P25336 DSC3YOR223W 879 nt8.02□□□□□ -1.13
MSH3P25336 CRN1YLR429W 1956 nt8.02□□□□□ -1.13
MSH3P25336 SKY1YMR216C 2229 nt8.02□□□□□ -1.13
MSH3P25336 ERG24YNL280C 1317 nt8.02□□□□□ -1.13
MSH3P25336 YOR343CYOR343C 327 nt8.01□□□□□ -1.13
MSH3P25336 YPL168WYPL168W 1293 nt8.01□□□□□ -1.13
MSH3P25336 CAN1YEL063C 1773 nt8.01□□□□□ -1.13
MSH3P25336 ENB1YOL158C 1821 nt8.01□□□□□ -1.13
MSH3P25336 YKR023WYKR023W 1593 nt8.01□□□□□ -1.13
MSH3P25336 PRY2YKR013W 990 nt8□□□□□ -1.13
MSH3P25336 SVF1YDR346C 1446 nt8□□□□□ -1.13
MSH3P25336 NDJ1YOL104C 1059 nt7.99□□□□□ -1.13
MSH3P25336 RSP5YER125W 2430 nt7.99□□□□□ -1.13
MSH3P25336 STS1YIR011C 960 nt7.98□□□□□ -1.13
MSH3P25336 YJR142WYJR142W 1029 nt7.98□□□□□ -1.13
MSH3P25336 LIP5YOR196C 1245 nt7.98□□□□□ -1.13
MSH3P25336 YHR131CYHR131C 2553 nt7.98□□□□□ -1.13
MSH3P25336 HRB1YNL004W 1365 nt7.97□□□□□ -1.13
MSH3P25336 PRP2YNR011C 2631 nt7.97□□□□□ -1.13
MSH3P25336 tL(UAA)B1tL(UAA)B1 84 nt7.97□□□□□ -1.13
MSH3P25336 tL(UAA)B2tL(UAA)B2 84 nt7.97□□□□□ -1.13
MSH3P25336 tL(UAA)DtL(UAA)D 84 nt7.97□□□□□ -1.13
MSH3P25336 SUP51tL(UAA)J 84 nt7.97□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms