Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 ORT1YOR130C 879 nt10.68□□□□□ -0.7
TY1B-PR3P0C2J1 LIP5YOR196C 1245 nt10.67□□□□□ -0.7
TY1B-PR3P0C2J1 ERG24YNL280C 1317 nt10.67□□□□□ -0.7
TY1B-PR3P0C2J1 EMP65YER140W 1671 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 PDC5YLR134W 1692 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 BEM1YBR200W 1656 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)BtD(GUC)B 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)DtD(GUC)D 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)G1tD(GUC)G1 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)G2tD(GUC)G2 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)I1tD(GUC)I1 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)I2tD(GUC)I2 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)J1tD(GUC)J1 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)J2tD(GUC)J2 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)J3tD(GUC)J3 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)J4tD(GUC)J4 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)KtD(GUC)K 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)L1tD(GUC)L1 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)L2tD(GUC)L2 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)MtD(GUC)M 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 tD(GUC)OtD(GUC)O 72 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 FMO1YHR176W 1299 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 YOL099CYOL099C 492 nt10.66□□□□□ -0.7
TY1B-PR3P0C2J1 SNA3YJL151C 402 nt10.65□□□□□ -0.7
TY1B-PR3P0C2J1 snR4snR4 186 nt10.65□□□□□ -0.71
TY1B-PR3P0C2J1 GPA2YER020W 1350 nt10.64□□□□□ -0.71
TY1B-PR3P0C2J1 YNL097W-AYNL097W-A 156 nt10.64□□□□□ -0.71
TY1B-PR3P0C2J1 ZWF1YNL241C 1518 nt10.63□□□□□ -0.71
TY1B-PR3P0C2J1 PGI1YBR196C 1665 nt10.63□□□□□ -0.71
TY1B-PR3P0C2J1 AFG3YER017C 2286 nt10.63□□□□□ -0.71
TY1B-PR3P0C2J1 HNM1YGL077C 1692 nt10.62□□□□□ -0.71
TY1B-PR3P0C2J1 NBA1YOL070C 1506 nt10.62□□□□□ -0.71
TY1B-PR3P0C2J1 HMG2YLR450W 3138 nt10.6□□□□□ -0.71
TY1B-PR3P0C2J1 LYS21YDL131W 1323 nt10.6□□□□□ -0.71
TY1B-PR3P0C2J1 VMA3YEL027W 483 nt10.6□□□□□ -0.71
TY1B-PR3P0C2J1 MIM1YOL026C 342 nt10.6□□□□□ -0.71
TY1B-PR3P0C2J1 HED1YDR014W-A 489 nt10.6□□□□□ -0.71
TY1B-PR3P0C2J1 YGL102CYGL102C 429 nt10.6□□□□□ -0.71
TY1B-PR3P0C2J1 ERR1YOR393W 1314 nt10.59□□□□□ -0.71
TY1B-PR3P0C2J1 ERR2YPL281C 1314 nt10.59□□□□□ -0.71
TY1B-PR3P0C2J1 SMX3YPR182W 261 nt10.59□□□□□ -0.71
TY1B-PR3P0C2J1 ICP55YER078C 1536 nt10.59□□□□□ -0.71
TY1B-PR3P0C2J1 HPT1YDR399W 666 nt10.58□□□□□ -0.72
TY1B-PR3P0C2J1 MOG1YJR074W 657 nt10.57□□□□□ -0.72
TY1B-PR3P0C2J1 PFS2YNL317W 1398 nt10.57□□□□□ -0.72
TY1B-PR3P0C2J1 CUE4YML101C 354 nt10.57□□□□□ -0.72
TY1B-PR3P0C2J1 REC107YJR021C 945 nt10.56□□□□□ -0.72
TY1B-PR3P0C2J1 YKL018C-AYKL018C-A 300 nt10.55□□□□□ -0.72
TY1B-PR3P0C2J1 ERG27YLR100W 1044 nt10.55□□□□□ -0.72
TY1B-PR3P0C2J1 RAD59YDL059C 717 nt10.54□□□□□ -0.72
TY1B-PR3P0C2J1 TPI1YDR050C 747 nt10.54□□□□□ -0.72
TY1B-PR3P0C2J1 NAS6YGR232W 687 nt10.54□□□□□ -0.72
TY1B-PR3P0C2J1 RPL43AYPR043W 279 nt10.54□□□□□ -0.72
TY1B-PR3P0C2J1 PMT1YDL095W 2454 nt10.53□□□□□ -0.72
TY1B-PR3P0C2J1 IVY1YDR229W 1362 nt10.53□□□□□ -0.72
TY1B-PR3P0C2J1 OM45YIL136W 1182 nt10.53□□□□□ -0.72
TY1B-PR3P0C2J1 TIF2YJL138C 1188 nt10.52□□□□□ -0.72
TY1B-PR3P0C2J1 TIF1YKR059W 1188 nt10.52□□□□□ -0.72
TY1B-PR3P0C2J1 GTS1YGL181W 1191 nt10.52□□□□□ -0.73
TY1B-PR3P0C2J1 MRPL10YNL284C 969 nt10.52□□□□□ -0.73
TY1B-PR3P0C2J1 YBR027CYBR027C 333 nt10.52□□□□□ -0.73
TY1B-PR3P0C2J1 CSL4YNL232W 879 nt10.51□□□□□ -0.73
TY1B-PR3P0C2J1 PRI1YIR008C 1230 nt10.5□□□□□ -0.73
TY1B-PR3P0C2J1 YMR279CYMR279C 1623 nt10.5□□□□□ -0.73
TY1B-PR3P0C2J1 MSP1YGR028W 1089 nt10.49□□□□□ -0.73
TY1B-PR3P0C2J1 CDC7YDL017W 1524 nt10.49□□□□□ -0.73
TY1B-PR3P0C2J1 MHT1YLL062C 975 nt10.48□□□□□ -0.73
TY1B-PR3P0C2J1 YHR213W-BYHR213W-B 300 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 YAR064WYAR064W 300 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 MRPL23YOR150W 492 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 ERG8YMR220W 1356 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 CUP2YGL166W 678 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 YKL077WYKL077W 1179 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 YAL045CYAL045C 309 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 SEN34YAR008W 828 nt10.47□□□□□ -0.73
TY1B-PR3P0C2J1 PTC7YHR076W 1032 nt10.46□□□□□ -0.74
TY1B-PR3P0C2J1 SEC62YPL094C 825 nt10.46□□□□□ -0.74
TY1B-PR3P0C2J1 DUS3YLR401C 2007 nt10.46□□□□□ -0.74
TY1B-PR3P0C2J1 DSF1YEL070W 1509 nt10.46□□□□□ -0.74
TY1B-PR3P0C2J1 YNR073CYNR073C 1509 nt10.46□□□□□ -0.74
TY1B-PR3P0C2J1 SPG5YMR191W 1122 nt10.45□□□□□ -0.74
TY1B-PR3P0C2J1 YPR196WYPR196W 1413 nt10.44□□□□□ -0.74
TY1B-PR3P0C2J1 DLD1YDL174C 1764 nt10.44□□□□□ -0.74
TY1B-PR3P0C2J1 THR1YHR025W 1074 nt10.43□□□□□ -0.74
TY1B-PR3P0C2J1 YLR157W-EYLR157W-E 165 nt10.43□□□□□ -0.74
TY1B-PR3P0C2J1 PEX3YDR329C 1326 nt10.42□□□□□ -0.74
TY1B-PR3P0C2J1 EGD2YHR193C 525 nt10.42□□□□□ -0.74
TY1B-PR3P0C2J1 UIP5YKR044W 1332 nt10.42□□□□□ -0.74
TY1B-PR3P0C2J1 DON1YDR273W 1098 nt10.42□□□□□ -0.74
TY1B-PR3P0C2J1 MSS51YLR203C 1311 nt10.41□□□□□ -0.74
TY1B-PR3P0C2J1 RNH1YMR234W 1047 nt10.41□□□□□ -0.74
TY1B-PR3P0C2J1 CTA1YDR256C 1548 nt10.41□□□□□ -0.74
TY1B-PR3P0C2J1 SUR7YML052W 909 nt10.39□□□□□ -0.75
TY1B-PR3P0C2J1 HVG1YER039C 750 nt10.39□□□□□ -0.75
TY1B-PR3P0C2J1 RPL31BYLR406C 342 nt10.39□□□□□ -0.75
TY1B-PR3P0C2J1 RTC2YBR147W 891 nt10.38□□□□□ -0.75
TY1B-PR3P0C2J1 YBL113CYBL113C 2379 nt10.37□□□□□ -0.75
TY1B-PR3P0C2J1 HIS1YER055C 894 nt10.37□□□□□ -0.75
TY1B-PR3P0C2J1 MPC2YHR162W 390 nt10.37□□□□□ -0.75
TY1B-PR3P0C2J1 ECM19YLR390W 339 nt10.37□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 85.1 ms