Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.78■□□□□ 0.92
Hps1O08983 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps1O08983 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps1O08983 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps1O08983 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps1O08983 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.77■□□□□ 0.92
Hps1O08983 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hps1O08983 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hps1O08983 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.77■□□□□ 0.92
Hps1O08983 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hps1O08983 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Hps1O08983 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps1O08983 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps1O08983 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hps1O08983 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps1O08983 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hps1O08983 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hps1O08983 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hps1O08983 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hps1O08983 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps1O08983 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps1O08983 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps1O08983 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hps1O08983 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps1O08983 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.73■□□□□ 0.91
Hps1O08983 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps1O08983 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hps1O08983 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hps1O08983 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hps1O08983 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hps1O08983 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hps1O08983 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps1O08983 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps1O08983 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Hps1O08983 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hps1O08983 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps1O08983 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Hps1O08983 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps1O08983 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.71■□□□□ 0.91
Hps1O08983 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps1O08983 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps1O08983 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hps1O08983 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hps1O08983 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hps1O08983 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.7■□□□□ 0.9
Hps1O08983 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hps1O08983 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hps1O08983 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hps1O08983 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hps1O08983 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hps1O08983 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps1O08983 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps1O08983 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Hps1O08983 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps1O08983 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps1O08983 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps1O08983 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hps1O08983 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.67■□□□□ 0.9
Hps1O08983 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hps1O08983 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hps1O08983 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hps1O08983 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hps1O08983 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hps1O08983 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps1O08983 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps1O08983 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps1O08983 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hps1O08983 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.64■□□□□ 0.89
Hps1O08983 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hps1O08983 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.64■□□□□ 0.89
Hps1O08983 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps1O08983 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Hps1O08983 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Hps1O08983 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hps1O08983 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps1O08983 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps1O08983 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.62■□□□□ 0.89
Hps1O08983 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps1O08983 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.62■□□□□ 0.89
Hps1O08983 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps1O08983 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps1O08983 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.62■□□□□ 0.89
Hps1O08983 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps1O08983 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hps1O08983 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hps1O08983 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps1O08983 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.61■□□□□ 0.89
Hps1O08983 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps1O08983 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps1O08983 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps1O08983 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Hps1O08983 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms