Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6d-7A0A075B6B0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6d-7A0A075B6B0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6d-7A0A075B6B0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6d-7A0A075B6B0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav6d-7A0A075B6B0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6d-7A0A075B6B0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6d-7A0A075B6B0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6d-7A0A075B6B0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav6d-7A0A075B6B0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6d-7A0A075B6B0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav6d-7A0A075B6B0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav6d-7A0A075B6B0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6d-7A0A075B6B0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6d-7A0A075B6B0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6d-7A0A075B6B0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6d-7A0A075B6B0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6d-7A0A075B6B0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6d-7A0A075B6B0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
Trav6d-7A0A075B6B0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6d-7A0A075B6B0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6d-7A0A075B6B0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6d-7A0A075B6B0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-7A0A075B6B0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-7A0A075B6B0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-7A0A075B6B0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-7A0A075B6B0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-7A0A075B6B0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav6d-7A0A075B6B0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-7A0A075B6B0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-7A0A075B6B0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-7A0A075B6B0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.37■□□□□ 0.37
Trav6d-7A0A075B6B0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-7A0A075B6B0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-7A0A075B6B0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Gm30023-201ENSMUST00000197970 889 ntBASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Particl-201ENSMUST00000205370 1560 ntBASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Trav6d-7A0A075B6B0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-7A0A075B6B0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trav6d-7A0A075B6B0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-7A0A075B6B0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-7A0A075B6B0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-7A0A075B6B0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-7A0A075B6B0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-7A0A075B6B0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-7A0A075B6B0 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.34■□□□□ 0.37
Trav6d-7A0A075B6B0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-7A0A075B6B0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-7A0A075B6B0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6d-7A0A075B6B0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6d-7A0A075B6B0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.33■□□□□ 0.36
Trav6d-7A0A075B6B0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-7A0A075B6B0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-7A0A075B6B0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-7A0A075B6B0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-7A0A075B6B0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-7A0A075B6B0 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.32■□□□□ 0.36
Trav6d-7A0A075B6B0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav6d-7A0A075B6B0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-7A0A075B6B0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav6d-7A0A075B6B0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.31■□□□□ 0.36
Trav6d-7A0A075B6B0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-7A0A075B6B0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-7A0A075B6B0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-7A0A075B6B0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-7A0A075B6B0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav6d-7A0A075B6B0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav6d-7A0A075B6B0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-7A0A075B6B0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-7A0A075B6B0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-7A0A075B6B0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-7A0A075B6B0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-7A0A075B6B0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6d-7A0A075B6B0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-7A0A075B6B0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-7A0A075B6B0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-7A0A075B6B0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav6d-7A0A075B6B0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-7A0A075B6B0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6d-7A0A075B6B0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-7A0A075B6B0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-7A0A075B6B0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6d-7A0A075B6B0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav6d-7A0A075B6B0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-7A0A075B6B0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-7A0A075B6B0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6d-7A0A075B6B0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav6d-7A0A075B6B0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav6d-7A0A075B6B0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav6d-7A0A075B6B0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-7A0A075B6B0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms