Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
SNAP47Q5SQN1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.08■□□□□ 0.49
SNAP47Q5SQN1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAP47Q5SQN1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.08■□□□□ 0.49
SNAP47Q5SQN1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
SNAP47Q5SQN1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 ZNF444P1-201ENST00000559497 298 ntBASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 AC083849.1-201ENST00000615227 514 ntBASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAP47Q5SQN1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 AC005082.1-201ENST00000413042 2259 ntBASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 TEX21P-204ENST00000641479 1693 ntBASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 KRT18P56-201ENST00000507275 550 ntBASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 MIR3180-5-201ENST00000583743 153 ntBASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAP47Q5SQN1 KRT8P3-201ENST00000519669 1449 ntBASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 AC034232.1-201ENST00000506026 1064 ntBASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.06■□□□□ 0.48
SNAP47Q5SQN1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAP47Q5SQN1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
SNAP47Q5SQN1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms