Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rcl1Q9JJT0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rcl1Q9JJT0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rcl1Q9JJT0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rcl1Q9JJT0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rcl1Q9JJT0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rcl1Q9JJT0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rcl1Q9JJT0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rcl1Q9JJT0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rcl1Q9JJT0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.2■□□□□ 0.66
Rcl1Q9JJT0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rcl1Q9JJT0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rcl1Q9JJT0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rcl1Q9JJT0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rcl1Q9JJT0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rcl1Q9JJT0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rcl1Q9JJT0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rcl1Q9JJT0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rcl1Q9JJT0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rcl1Q9JJT0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rcl1Q9JJT0 Gm8503-201ENSMUST00000118131 455 ntBASIC19.18■□□□□ 0.66
Rcl1Q9JJT0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.18■□□□□ 0.66
Rcl1Q9JJT0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Rcl1Q9JJT0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rcl1Q9JJT0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.18■□□□□ 0.66
Rcl1Q9JJT0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.17■□□□□ 0.66
Rcl1Q9JJT0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rcl1Q9JJT0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rcl1Q9JJT0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rcl1Q9JJT0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rcl1Q9JJT0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Rcl1Q9JJT0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rcl1Q9JJT0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rcl1Q9JJT0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.14■□□□□ 0.66
Rcl1Q9JJT0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rcl1Q9JJT0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Nkain2-201ENSMUST00000092602 558 ntBASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rcl1Q9JJT0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rcl1Q9JJT0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.13■□□□□ 0.65
Rcl1Q9JJT0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rcl1Q9JJT0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rcl1Q9JJT0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rcl1Q9JJT0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rcl1Q9JJT0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rcl1Q9JJT0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rcl1Q9JJT0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rcl1Q9JJT0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rcl1Q9JJT0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rcl1Q9JJT0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rcl1Q9JJT0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rcl1Q9JJT0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rcl1Q9JJT0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rcl1Q9JJT0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rcl1Q9JJT0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rcl1Q9JJT0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rcl1Q9JJT0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rcl1Q9JJT0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.09■□□□□ 0.65
Rcl1Q9JJT0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rcl1Q9JJT0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rcl1Q9JJT0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Rcl1Q9JJT0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rcl1Q9JJT0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rcl1Q9JJT0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rcl1Q9JJT0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rcl1Q9JJT0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rcl1Q9JJT0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.07■□□□□ 0.64
Rcl1Q9JJT0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rcl1Q9JJT0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rcl1Q9JJT0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rcl1Q9JJT0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rcl1Q9JJT0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rcl1Q9JJT0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rcl1Q9JJT0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rcl1Q9JJT0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rcl1Q9JJT0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rcl1Q9JJT0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms