Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scn3bQ8BHK2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Scn3bQ8BHK2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Scn3bQ8BHK2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn3bQ8BHK2 Particl-201ENSMUST00000205370 1560 ntBASIC21.3■■□□□ 1
Scn3bQ8BHK2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Scn3bQ8BHK2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Scn3bQ8BHK2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn3bQ8BHK2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn3bQ8BHK2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Scn3bQ8BHK2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn3bQ8BHK2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn3bQ8BHK2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn3bQ8BHK2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn3bQ8BHK2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Scn3bQ8BHK2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn3bQ8BHK2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn3bQ8BHK2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.26■□□□□ 0.99
Scn3bQ8BHK2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.25■□□□□ 0.99
Scn3bQ8BHK2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.25■□□□□ 0.99
Scn3bQ8BHK2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Scn3bQ8BHK2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn3bQ8BHK2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn3bQ8BHK2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn3bQ8BHK2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.24■□□□□ 0.99
Scn3bQ8BHK2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Scn3bQ8BHK2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Gm24804-201ENSMUST00000174982 85 ntBASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Scn3bQ8BHK2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn3bQ8BHK2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn3bQ8BHK2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn3bQ8BHK2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.22■□□□□ 0.99
Scn3bQ8BHK2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn3bQ8BHK2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn3bQ8BHK2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Scn3bQ8BHK2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn3bQ8BHK2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Scn3bQ8BHK2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn3bQ8BHK2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn3bQ8BHK2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn3bQ8BHK2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Scn3bQ8BHK2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Scn3bQ8BHK2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.2■□□□□ 0.98
Scn3bQ8BHK2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn3bQ8BHK2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn3bQ8BHK2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scn3bQ8BHK2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn3bQ8BHK2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Scn3bQ8BHK2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn3bQ8BHK2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn3bQ8BHK2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn3bQ8BHK2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Scn3bQ8BHK2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn3bQ8BHK2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scn3bQ8BHK2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn3bQ8BHK2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn3bQ8BHK2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn3bQ8BHK2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn3bQ8BHK2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn3bQ8BHK2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Scn3bQ8BHK2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn3bQ8BHK2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn3bQ8BHK2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn3bQ8BHK2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn3bQ8BHK2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.16■□□□□ 0.98
Scn3bQ8BHK2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn3bQ8BHK2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn3bQ8BHK2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn3bQ8BHK2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Scn3bQ8BHK2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn3bQ8BHK2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Scn3bQ8BHK2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.14■□□□□ 0.97
Scn3bQ8BHK2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms