Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Clns1aQ61189 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Clns1aQ61189 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clns1aQ61189 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clns1aQ61189 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clns1aQ61189 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clns1aQ61189 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clns1aQ61189 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clns1aQ61189 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clns1aQ61189 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.56■□□□□ 0.72
Clns1aQ61189 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.56■□□□□ 0.72
Clns1aQ61189 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clns1aQ61189 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clns1aQ61189 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clns1aQ61189 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clns1aQ61189 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clns1aQ61189 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.54■□□□□ 0.72
Clns1aQ61189 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clns1aQ61189 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.53■□□□□ 0.72
Clns1aQ61189 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clns1aQ61189 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clns1aQ61189 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clns1aQ61189 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clns1aQ61189 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Clns1aQ61189 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Clns1aQ61189 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clns1aQ61189 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clns1aQ61189 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Clns1aQ61189 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clns1aQ61189 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Clns1aQ61189 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clns1aQ61189 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clns1aQ61189 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clns1aQ61189 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clns1aQ61189 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Clns1aQ61189 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clns1aQ61189 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clns1aQ61189 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clns1aQ61189 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clns1aQ61189 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Clns1aQ61189 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clns1aQ61189 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clns1aQ61189 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clns1aQ61189 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clns1aQ61189 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clns1aQ61189 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clns1aQ61189 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.48■□□□□ 0.71
Clns1aQ61189 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.48■□□□□ 0.71
Clns1aQ61189 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clns1aQ61189 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clns1aQ61189 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clns1aQ61189 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.47■□□□□ 0.71
Clns1aQ61189 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clns1aQ61189 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clns1aQ61189 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clns1aQ61189 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clns1aQ61189 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clns1aQ61189 Gm24804-201ENSMUST00000174982 85 ntBASIC19.45■□□□□ 0.7
Clns1aQ61189 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clns1aQ61189 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.45■□□□□ 0.7
Clns1aQ61189 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clns1aQ61189 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.45■□□□□ 0.7
Clns1aQ61189 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clns1aQ61189 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.44■□□□□ 0.7
Clns1aQ61189 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clns1aQ61189 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clns1aQ61189 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clns1aQ61189 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clns1aQ61189 Particl-201ENSMUST00000205370 1560 ntBASIC19.42■□□□□ 0.7
Clns1aQ61189 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clns1aQ61189 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Clns1aQ61189 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Clns1aQ61189 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clns1aQ61189 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
Clns1aQ61189 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clns1aQ61189 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clns1aQ61189 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clns1aQ61189 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clns1aQ61189 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clns1aQ61189 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clns1aQ61189 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clns1aQ61189 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clns1aQ61189 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.4■□□□□ 0.7
Clns1aQ61189 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clns1aQ61189 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clns1aQ61189 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clns1aQ61189 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clns1aQ61189 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Clns1aQ61189 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clns1aQ61189 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms