Protein–RNA interactions for Protein: Q3TKR2

Xlr4c, X-linked lymphocyte-regulated 4C, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xlr4cQ3TKR2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Xlr4cQ3TKR2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Xlr4cQ3TKR2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Xlr4cQ3TKR2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Xlr4cQ3TKR2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Xlr4cQ3TKR2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Xlr4cQ3TKR2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Xlr4cQ3TKR2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Xlr4cQ3TKR2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Xlr4cQ3TKR2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Xlr4cQ3TKR2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Xlr4cQ3TKR2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Xlr4cQ3TKR2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Xlr4cQ3TKR2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xlr4cQ3TKR2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xlr4cQ3TKR2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xlr4cQ3TKR2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Xlr4cQ3TKR2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.19■□□□□ 0.82
Xlr4cQ3TKR2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xlr4cQ3TKR2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xlr4cQ3TKR2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xlr4cQ3TKR2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Xlr4cQ3TKR2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Xlr4cQ3TKR2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xlr4cQ3TKR2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xlr4cQ3TKR2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xlr4cQ3TKR2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Xlr4cQ3TKR2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xlr4cQ3TKR2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Xlr4cQ3TKR2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xlr4cQ3TKR2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xlr4cQ3TKR2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xlr4cQ3TKR2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Xlr4cQ3TKR2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Xlr4cQ3TKR2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xlr4cQ3TKR2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xlr4cQ3TKR2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xlr4cQ3TKR2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xlr4cQ3TKR2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Xlr4cQ3TKR2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xlr4cQ3TKR2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xlr4cQ3TKR2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Xlr4cQ3TKR2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.13■□□□□ 0.81
Xlr4cQ3TKR2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Xlr4cQ3TKR2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Xlr4cQ3TKR2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Xlr4cQ3TKR2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xlr4cQ3TKR2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xlr4cQ3TKR2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xlr4cQ3TKR2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.11■□□□□ 0.81
Xlr4cQ3TKR2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Xlr4cQ3TKR2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xlr4cQ3TKR2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Xlr4cQ3TKR2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xlr4cQ3TKR2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xlr4cQ3TKR2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.1■□□□□ 0.81
Xlr4cQ3TKR2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.1■□□□□ 0.81
Xlr4cQ3TKR2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Xlr4cQ3TKR2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xlr4cQ3TKR2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Xlr4cQ3TKR2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Xlr4cQ3TKR2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Xlr4cQ3TKR2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Xlr4cQ3TKR2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Xlr4cQ3TKR2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Xlr4cQ3TKR2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Xlr4cQ3TKR2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Xlr4cQ3TKR2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.07■□□□□ 0.8
Xlr4cQ3TKR2 Gm30023-201ENSMUST00000197970 889 ntBASIC20.07■□□□□ 0.8
Xlr4cQ3TKR2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Xlr4cQ3TKR2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Xlr4cQ3TKR2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Xlr4cQ3TKR2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Xlr4cQ3TKR2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Xlr4cQ3TKR2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Xlr4cQ3TKR2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.06■□□□□ 0.8
Xlr4cQ3TKR2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Xlr4cQ3TKR2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Xlr4cQ3TKR2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xlr4cQ3TKR2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xlr4cQ3TKR2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xlr4cQ3TKR2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Xlr4cQ3TKR2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xlr4cQ3TKR2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 189 ms