Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 PAM17YKR065C 594 nt11.34□□□□□ -0.59
RKR1Q04781 CYT1YOR065W 930 nt11.34□□□□□ -0.59
RKR1Q04781 KTR4YBR199W 1395 nt11.33□□□□□ -0.59
RKR1Q04781 GPD2YOL059W 1323 nt11.33□□□□□ -0.6
RKR1Q04781 MET13YGL125W 1803 nt11.33□□□□□ -0.6
RKR1Q04781 FTH1YBR207W 1398 nt11.33□□□□□ -0.6
RKR1Q04781 ERR3YMR323W 1314 nt11.33□□□□□ -0.6
RKR1Q04781 IMG1YCR046C 510 nt11.33□□□□□ -0.6
RKR1Q04781 TUB1YML085C 1344 nt11.3□□□□□ -0.6
RKR1Q04781 YOL046CYOL046C 675 nt11.29□□□□□ -0.6
RKR1Q04781 MPE1YKL059C 1326 nt11.28□□□□□ -0.6
RKR1Q04781 LCL3YGL085W 825 nt11.28□□□□□ -0.6
RKR1Q04781 GET4YOR164C 939 nt11.28□□□□□ -0.6
RKR1Q04781 ILV6YCL009C 930 nt11.28□□□□□ -0.6
RKR1Q04781 HTZ1YOL012C 405 nt11.27□□□□□ -0.61
RKR1Q04781 AGX1YFL030W 1158 nt11.26□□□□□ -0.61
RKR1Q04781 FSF1YOR271C 984 nt11.26□□□□□ -0.61
RKR1Q04781 HOC1YJR075W 1191 nt11.25□□□□□ -0.61
RKR1Q04781 MED6YHR058C 888 nt11.24□□□□□ -0.61
RKR1Q04781 CIT2YCR005C 1383 nt11.24□□□□□ -0.61
RKR1Q04781 YIL029W-AYIL029W-A 372 nt11.24□□□□□ -0.61
RKR1Q04781 TPO4YOR273C 1980 nt11.24□□□□□ -0.61
RKR1Q04781 CRH1YGR189C 1524 nt11.23□□□□□ -0.61
RKR1Q04781 DMC1YER179W 1005 nt11.23□□□□□ -0.61
RKR1Q04781 RPL2AYFR031C-A 765 nt11.23□□□□□ -0.61
RKR1Q04781 RPL2BYIL018W 765 nt11.23□□□□□ -0.61
RKR1Q04781 LSC1YOR142W 990 nt11.23□□□□□ -0.61
RKR1Q04781 COX15YER141W 1461 nt11.22□□□□□ -0.61
RKR1Q04781 NBA1YOL070C 1506 nt11.22□□□□□ -0.61
RKR1Q04781 PET10YKR046C 852 nt11.21□□□□□ -0.61
RKR1Q04781 RTC4YNL254C 1206 nt11.21□□□□□ -0.61
RKR1Q04781 YEL075W-AYEL075W-A 612 nt11.2□□□□□ -0.62
RKR1Q04781 YLR463CYLR463C 552 nt11.2□□□□□ -0.62
RKR1Q04781 YPR076WYPR076W 375 nt11.2□□□□□ -0.62
RKR1Q04781 YHR218W-AYHR218W-A 318 nt11.19□□□□□ -0.62
RKR1Q04781 YBL112CYBL112C 318 nt11.19□□□□□ -0.62
RKR1Q04781 PLB2YMR006C 2121 nt11.19□□□□□ -0.62
RKR1Q04781 LEO1YOR123C 1395 nt11.18□□□□□ -0.62
RKR1Q04781 FIT2YOR382W 462 nt11.18□□□□□ -0.62
RKR1Q04781 YDL144CYDL144C 1071 nt11.17□□□□□ -0.62
RKR1Q04781 CAR2YLR438W 1275 nt11.17□□□□□ -0.62
RKR1Q04781 YNR001W-AYNR001W-A 219 nt11.17□□□□□ -0.62
RKR1Q04781 RCF2YNR018W 675 nt11.17□□□□□ -0.62
RKR1Q04781 FMP40YPL222W 2067 nt11.17□□□□□ -0.62
RKR1Q04781 tD(GUC)BtD(GUC)B 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)DtD(GUC)D 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)G1tD(GUC)G1 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)G2tD(GUC)G2 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)I1tD(GUC)I1 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)I2tD(GUC)I2 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)J1tD(GUC)J1 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)J2tD(GUC)J2 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)J3tD(GUC)J3 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)J4tD(GUC)J4 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)KtD(GUC)K 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)L1tD(GUC)L1 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)L2tD(GUC)L2 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)MtD(GUC)M 72 nt11.16□□□□□ -0.62
RKR1Q04781 tD(GUC)OtD(GUC)O 72 nt11.16□□□□□ -0.62
RKR1Q04781 YPQ2YDR352W 954 nt11.16□□□□□ -0.62
RKR1Q04781 APE4YHR113W 1473 nt11.16□□□□□ -0.62
RKR1Q04781 PPH21YDL134C 1110 nt11.15□□□□□ -0.62
RKR1Q04781 PEX28YHR150W 1740 nt11.14□□□□□ -0.63
RKR1Q04781 YMR252CYMR252C 405 nt11.14□□□□□ -0.63
RKR1Q04781 YAH1YPL252C 519 nt11.12□□□□□ -0.63
RKR1Q04781 ASR1YPR093C 867 nt11.12□□□□□ -0.63
RKR1Q04781 AVL9YLR114C 2295 nt11.11□□□□□ -0.63
RKR1Q04781 TOP3YLR234W 1971 nt11.11□□□□□ -0.63
RKR1Q04781 PET117YER058W 324 nt11.11□□□□□ -0.63
RKR1Q04781 CKB1YGL019W 837 nt11.11□□□□□ -0.63
RKR1Q04781 FPR3YML074C 1236 nt11.11□□□□□ -0.63
RKR1Q04781 YHL008CYHL008C 1884 nt11.1□□□□□ -0.63
RKR1Q04781 COQ3YOL096C 939 nt11.1□□□□□ -0.63
RKR1Q04781 OSW2YLR054C 2175 nt11.09□□□□□ -0.63
RKR1Q04781 snR4snR4 186 nt11.08□□□□□ -0.64
RKR1Q04781 SUF3tG(CCC)D 72 nt11.07□□□□□ -0.64
RKR1Q04781 ADE5,7YGL234W 2409 nt11.07□□□□□ -0.64
RKR1Q04781 RBS1YDL189W 1374 nt11.06□□□□□ -0.64
RKR1Q04781 ASF1YJL115W 840 nt11.05□□□□□ -0.64
RKR1Q04781 MIM1YOL026C 342 nt11.04□□□□□ -0.64
RKR1Q04781 PRE3YJL001W 648 nt11.03□□□□□ -0.64
RKR1Q04781 BRN1YBL097W 2265 nt11.03□□□□□ -0.64
RKR1Q04781 NTG2YOL043C 1143 nt11.03□□□□□ -0.64
RKR1Q04781 YIP4YGL198W 708 nt11.02□□□□□ -0.65
RKR1Q04781 MRPS18YNL306W 654 nt11.02□□□□□ -0.65
RKR1Q04781 YKL102CYKL102C 306 nt11.01□□□□□ -0.65
RKR1Q04781 ORT1YOR130C 879 nt11.01□□□□□ -0.65
RKR1Q04781 PDC5YLR134W 1692 nt11.01□□□□□ -0.65
RKR1Q04781 URA8YJR103W 1737 nt11□□□□□ -0.65
RKR1Q04781 YML018CYML018C 1182 nt11□□□□□ -0.65
RKR1Q04781 YNR005CYNR005C 405 nt11□□□□□ -0.65
RKR1Q04781 ADE16YLR028C 1776 nt10.99□□□□□ -0.65
RKR1Q04781 SNA3YJL151C 402 nt10.99□□□□□ -0.65
RKR1Q04781 YLR361C-AYLR361C-A 297 nt10.98□□□□□ -0.65
RKR1Q04781 TAF9YMR236W 474 nt10.97□□□□□ -0.65
RKR1Q04781 ERG24YNL280C 1317 nt10.97□□□□□ -0.65
RKR1Q04781 RRP9YPR137W 1722 nt10.97□□□□□ -0.65
RKR1Q04781 SAL1YNL083W 1485 nt10.97□□□□□ -0.65
RKR1Q04781 YLL058WYLL058W 1728 nt10.96□□□□□ -0.65
RKR1Q04781 ADH5YBR145W 1056 nt10.96□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 119.5 ms