Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Uba52P62984 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Uba52P62984 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.7■□□□□ 0.74
Uba52P62984 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.7■□□□□ 0.74
Uba52P62984 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Uba52P62984 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Uba52P62984 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Uba52P62984 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Uba52P62984 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Uba52P62984 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Uba52P62984 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.69■□□□□ 0.74
Uba52P62984 Gm7432-201ENSMUST00000210343 879 ntBASIC19.69■□□□□ 0.74
Uba52P62984 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Uba52P62984 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Uba52P62984 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Uba52P62984 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Uba52P62984 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Uba52P62984 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Uba52P62984 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Uba52P62984 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Uba52P62984 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Uba52P62984 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Uba52P62984 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Uba52P62984 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Uba52P62984 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Uba52P62984 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Uba52P62984 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Uba52P62984 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.65■□□□□ 0.74
Uba52P62984 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Uba52P62984 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Uba52P62984 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Uba52P62984 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Uba52P62984 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Uba52P62984 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Uba52P62984 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Uba52P62984 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Uba52P62984 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Uba52P62984 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Uba52P62984 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Uba52P62984 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Uba52P62984 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Uba52P62984 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.61■□□□□ 0.73
Uba52P62984 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Uba52P62984 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Uba52P62984 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Uba52P62984 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Uba52P62984 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Uba52P62984 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Uba52P62984 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Uba52P62984 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Uba52P62984 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Uba52P62984 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Uba52P62984 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Uba52P62984 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.6■□□□□ 0.73
Uba52P62984 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Uba52P62984 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Uba52P62984 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Uba52P62984 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Uba52P62984 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Uba52P62984 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Uba52P62984 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Uba52P62984 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Uba52P62984 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Uba52P62984 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Uba52P62984 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Uba52P62984 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Uba52P62984 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Uba52P62984 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Uba52P62984 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Uba52P62984 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Uba52P62984 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.56■□□□□ 0.72
Uba52P62984 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.55■□□□□ 0.72
Uba52P62984 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Uba52P62984 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Uba52P62984 Gm11599-201ENSMUST00000118720 878 ntBASIC19.54■□□□□ 0.72
Uba52P62984 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Uba52P62984 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Uba52P62984 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Uba52P62984 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Uba52P62984 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Uba52P62984 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Uba52P62984 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Uba52P62984 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Uba52P62984 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.51■□□□□ 0.71
Uba52P62984 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Uba52P62984 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Uba52P62984 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Uba52P62984 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Uba52P62984 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Uba52P62984 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Uba52P62984 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Uba52P62984 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms