Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 YJL213WYJL213W 996 nt10.97□□□□□ -0.65
VTH1P40438 BDS1YOL164W 1941 nt10.96□□□□□ -0.66
VTH1P40438 YDR215CYDR215C 414 nt10.94□□□□□ -0.66
VTH1P40438 YIL029W-AYIL029W-A 372 nt10.94□□□□□ -0.66
VTH1P40438 YNL140CYNL140C 570 nt10.94□□□□□ -0.66
VTH1P40438 GET4YOR164C 939 nt10.94□□□□□ -0.66
VTH1P40438 RPL2AYFR031C-A 765 nt10.94□□□□□ -0.66
VTH1P40438 RPL2BYIL018W 765 nt10.94□□□□□ -0.66
VTH1P40438 COX15YER141W 1461 nt10.93□□□□□ -0.66
VTH1P40438 MPE1YKL059C 1326 nt10.93□□□□□ -0.66
VTH1P40438 HTZ1YOL012C 405 nt10.93□□□□□ -0.66
VTH1P40438 YPR076WYPR076W 375 nt10.92□□□□□ -0.66
VTH1P40438 CRH1YGR189C 1524 nt10.91□□□□□ -0.66
VTH1P40438 YHR218W-AYHR218W-A 318 nt10.91□□□□□ -0.66
VTH1P40438 YBL112CYBL112C 318 nt10.91□□□□□ -0.66
VTH1P40438 LSC1YOR142W 990 nt10.91□□□□□ -0.66
VTH1P40438 YGL114WYGL114W 2178 nt10.9□□□□□ -0.67
VTH1P40438 KTR4YBR199W 1395 nt10.89□□□□□ -0.67
VTH1P40438 CIT2YCR005C 1383 nt10.88□□□□□ -0.67
VTH1P40438 FMP40YPL222W 2067 nt10.88□□□□□ -0.67
VTH1P40438 YPQ2YDR352W 954 nt10.88□□□□□ -0.67
VTH1P40438 FYV1YDR024W 486 nt10.87□□□□□ -0.67
VTH1P40438 FSF1YOR271C 984 nt10.87□□□□□ -0.67
VTH1P40438 FIT2YOR382W 462 nt10.87□□□□□ -0.67
VTH1P40438 PPH21YDL134C 1110 nt10.86□□□□□ -0.67
VTH1P40438 YMR252CYMR252C 405 nt10.86□□□□□ -0.67
VTH1P40438 PLB2YMR006C 2121 nt10.86□□□□□ -0.67
VTH1P40438 YNR001W-AYNR001W-A 219 nt10.85□□□□□ -0.67
VTH1P40438 FTH1YBR207W 1398 nt10.84□□□□□ -0.67
VTH1P40438 HSL7YBR133C 2484 nt10.84□□□□□ -0.67
VTH1P40438 YEL075W-AYEL075W-A 612 nt10.84□□□□□ -0.67
VTH1P40438 YLR463CYLR463C 552 nt10.84□□□□□ -0.67
VTH1P40438 APE4YHR113W 1473 nt10.83□□□□□ -0.68
VTH1P40438 DMC1YER179W 1005 nt10.83□□□□□ -0.68
VTH1P40438 RTC4YNL254C 1206 nt10.83□□□□□ -0.68
VTH1P40438 OSW2YLR054C 2175 nt10.81□□□□□ -0.68
VTH1P40438 YOR200WYOR200W 399 nt10.81□□□□□ -0.68
VTH1P40438 ASR1YPR093C 867 nt10.81□□□□□ -0.68
VTH1P40438 PET10YKR046C 852 nt10.8□□□□□ -0.68
VTH1P40438 CYT1YOR065W 930 nt10.8□□□□□ -0.68
VTH1P40438 ADE5,7YGL234W 2409 nt10.8□□□□□ -0.68
VTH1P40438 RBS1YDL189W 1374 nt10.78□□□□□ -0.68
VTH1P40438 YKL147CYKL147C 618 nt10.78□□□□□ -0.68
VTH1P40438 CAR2YLR438W 1275 nt10.77□□□□□ -0.69
VTH1P40438 PET117YER058W 324 nt10.76□□□□□ -0.69
VTH1P40438 LEO1YOR123C 1395 nt10.75□□□□□ -0.69
VTH1P40438 PEX28YHR150W 1740 nt10.75□□□□□ -0.69
VTH1P40438 ASF1YJL115W 840 nt10.74□□□□□ -0.69
VTH1P40438 MRPS18YNL306W 654 nt10.74□□□□□ -0.69
VTH1P40438 TOP3YLR234W 1971 nt10.74□□□□□ -0.69
VTH1P40438 RCF2YNR018W 675 nt10.73□□□□□ -0.69
VTH1P40438 YAH1YPL252C 519 nt10.73□□□□□ -0.69
VTH1P40438 MED6YHR058C 888 nt10.72□□□□□ -0.69
VTH1P40438 YLR361C-AYLR361C-A 297 nt10.71□□□□□ -0.69
VTH1P40438 NBA1YOL070C 1506 nt10.71□□□□□ -0.7
VTH1P40438 YHL008CYHL008C 1884 nt10.71□□□□□ -0.7
VTH1P40438 TPO4YOR273C 1980 nt10.7□□□□□ -0.7
VTH1P40438 BRN1YBL097W 2265 nt10.7□□□□□ -0.7
VTH1P40438 YIP4YGL198W 708 nt10.7□□□□□ -0.7
VTH1P40438 TAF9YMR236W 474 nt10.7□□□□□ -0.7
VTH1P40438 SAL1YNL083W 1485 nt10.7□□□□□ -0.7
VTH1P40438 IRC7YFR055W 1023 nt10.69□□□□□ -0.7
VTH1P40438 YKL102CYKL102C 306 nt10.69□□□□□ -0.7
VTH1P40438 YNR005CYNR005C 405 nt10.69□□□□□ -0.7
VTH1P40438 AVL9YLR114C 2295 nt10.69□□□□□ -0.7
VTH1P40438 SUF3tG(CCC)D 72 nt10.68□□□□□ -0.7
VTH1P40438 ADE16YLR028C 1776 nt10.68□□□□□ -0.7
VTH1P40438 CKB1YGL019W 837 nt10.68□□□□□ -0.7
VTH1P40438 YML018CYML018C 1182 nt10.68□□□□□ -0.7
VTH1P40438 GPD2YOL059W 1323 nt10.68□□□□□ -0.7
VTH1P40438 NTG2YOL043C 1143 nt10.67□□□□□ -0.7
VTH1P40438 YCR049CYCR049C 447 nt10.66□□□□□ -0.7
VTH1P40438 CDC1YDR182W 1476 nt10.66□□□□□ -0.7
VTH1P40438 RRP9YPR137W 1722 nt10.65□□□□□ -0.7
VTH1P40438 URA8YJR103W 1737 nt10.64□□□□□ -0.71
VTH1P40438 tD(GUC)BtD(GUC)B 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)DtD(GUC)D 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)G1tD(GUC)G1 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)G2tD(GUC)G2 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)I1tD(GUC)I1 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)I2tD(GUC)I2 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)J1tD(GUC)J1 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)J2tD(GUC)J2 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)J3tD(GUC)J3 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)J4tD(GUC)J4 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)KtD(GUC)K 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)L1tD(GUC)L1 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)L2tD(GUC)L2 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)MtD(GUC)M 72 nt10.63□□□□□ -0.71
VTH1P40438 tD(GUC)OtD(GUC)O 72 nt10.63□□□□□ -0.71
VTH1P40438 PRE3YJL001W 648 nt10.63□□□□□ -0.71
VTH1P40438 YNL092WYNL092W 1203 nt10.63□□□□□ -0.71
VTH1P40438 COQ3YOL096C 939 nt10.62□□□□□ -0.71
VTH1P40438 NUP49YGL172W 1419 nt10.62□□□□□ -0.71
VTH1P40438 YLL058WYLL058W 1728 nt10.6□□□□□ -0.71
VTH1P40438 TFG2YGR005C 1203 nt10.6□□□□□ -0.71
VTH1P40438 YKR045CYKR045C 552 nt10.59□□□□□ -0.71
VTH1P40438 YMR295CYMR295C 594 nt10.59□□□□□ -0.71
VTH1P40438 ADH5YBR145W 1056 nt10.59□□□□□ -0.71
VTH1P40438 GCG1YER163C 699 nt10.58□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms