Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.76■■□□□ 1.23
Pdlim1O70400 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.76■■□□□ 1.23
Pdlim1O70400 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim1O70400 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
Pdlim1O70400 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pdlim1O70400 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pdlim1O70400 Gm9812-201ENSMUST00000061934 968 ntBASIC22.75■■□□□ 1.23
Pdlim1O70400 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pdlim1O70400 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pdlim1O70400 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pdlim1O70400 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pdlim1O70400 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pdlim1O70400 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pdlim1O70400 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pdlim1O70400 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pdlim1O70400 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pdlim1O70400 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pdlim1O70400 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pdlim1O70400 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pdlim1O70400 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pdlim1O70400 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pdlim1O70400 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Pdlim1O70400 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pdlim1O70400 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pdlim1O70400 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.71■■□□□ 1.23
Pdlim1O70400 Gm45364-201ENSMUST00000210883 159 ntBASIC22.71■■□□□ 1.23
Pdlim1O70400 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pdlim1O70400 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pdlim1O70400 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pdlim1O70400 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Pdlim1O70400 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.7■■□□□ 1.22
Pdlim1O70400 Gm6311-201ENSMUST00000073790 878 ntBASIC22.7■■□□□ 1.22
Pdlim1O70400 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pdlim1O70400 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.7■■□□□ 1.22
Pdlim1O70400 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdlim1O70400 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pdlim1O70400 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Pdlim1O70400 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pdlim1O70400 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pdlim1O70400 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.67■■□□□ 1.22
Pdlim1O70400 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.67■■□□□ 1.22
Pdlim1O70400 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.67■■□□□ 1.22
Pdlim1O70400 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pdlim1O70400 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Pdlim1O70400 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Pdlim1O70400 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pdlim1O70400 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pdlim1O70400 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.65■■□□□ 1.22
Pdlim1O70400 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pdlim1O70400 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pdlim1O70400 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.64■■□□□ 1.21
Pdlim1O70400 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim1O70400 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Pdlim1O70400 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim1O70400 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim1O70400 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim1O70400 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.62■■□□□ 1.21
Pdlim1O70400 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.62■■□□□ 1.21
Pdlim1O70400 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim1O70400 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim1O70400 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim1O70400 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim1O70400 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim1O70400 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim1O70400 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Pdlim1O70400 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim1O70400 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim1O70400 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Pdlim1O70400 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim1O70400 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Pdlim1O70400 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Pdlim1O70400 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim1O70400 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.59■■□□□ 1.21
Pdlim1O70400 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim1O70400 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pdlim1O70400 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.58■■□□□ 1.21
Pdlim1O70400 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pdlim1O70400 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pdlim1O70400 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pdlim1O70400 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pdlim1O70400 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim1O70400 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim1O70400 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim1O70400 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Pdlim1O70400 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim1O70400 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim1O70400 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Pdlim1O70400 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Pdlim1O70400 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim1O70400 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim1O70400 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim1O70400 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim1O70400 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim1O70400 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.54■■□□□ 1.2
Pdlim1O70400 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim1O70400 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim1O70400 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim1O70400 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.54■■□□□ 1.2
Pdlim1O70400 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim1O70400 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms