Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.41■□□□□ 0.7
Prrt1O35449 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.41■□□□□ 0.7
Prrt1O35449 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt1O35449 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt1O35449 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prrt1O35449 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt1O35449 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prrt1O35449 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt1O35449 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prrt1O35449 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prrt1O35449 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.39■□□□□ 0.69
Prrt1O35449 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prrt1O35449 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prrt1O35449 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Prrt1O35449 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prrt1O35449 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.38■□□□□ 0.69
Prrt1O35449 Particl-201ENSMUST00000205370 1560 ntBASIC19.38■□□□□ 0.69
Prrt1O35449 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prrt1O35449 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prrt1O35449 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prrt1O35449 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prrt1O35449 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prrt1O35449 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prrt1O35449 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prrt1O35449 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.37■□□□□ 0.69
Prrt1O35449 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.37■□□□□ 0.69
Prrt1O35449 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prrt1O35449 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Prrt1O35449 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prrt1O35449 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prrt1O35449 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prrt1O35449 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prrt1O35449 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Prrt1O35449 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prrt1O35449 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prrt1O35449 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prrt1O35449 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prrt1O35449 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prrt1O35449 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prrt1O35449 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prrt1O35449 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prrt1O35449 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prrt1O35449 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.35■□□□□ 0.69
Prrt1O35449 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prrt1O35449 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.34■□□□□ 0.69
Prrt1O35449 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.34■□□□□ 0.69
Prrt1O35449 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Prrt1O35449 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prrt1O35449 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prrt1O35449 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prrt1O35449 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prrt1O35449 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prrt1O35449 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prrt1O35449 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prrt1O35449 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prrt1O35449 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prrt1O35449 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt1O35449 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt1O35449 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Prrt1O35449 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Prrt1O35449 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt1O35449 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prrt1O35449 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt1O35449 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt1O35449 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt1O35449 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prrt1O35449 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.31■□□□□ 0.68
Prrt1O35449 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt1O35449 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt1O35449 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt1O35449 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prrt1O35449 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt1O35449 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prrt1O35449 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt1O35449 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 Gm16148-201ENSMUST00000119653 893 ntBASIC19.29■□□□□ 0.68
Prrt1O35449 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt1O35449 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.28■□□□□ 0.68
Prrt1O35449 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt1O35449 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt1O35449 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.28■□□□□ 0.68
Prrt1O35449 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt1O35449 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt1O35449 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prrt1O35449 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt1O35449 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prrt1O35449 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt1O35449 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prrt1O35449 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Prrt1O35449 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prrt1O35449 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt1O35449 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt1O35449 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt1O35449 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms