Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BC035044E0CXF8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BC035044E0CXF8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BC035044E0CXF8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BC035044E0CXF8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
BC035044E0CXF8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BC035044E0CXF8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BC035044E0CXF8 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.64■□□□□ 0.73
BC035044E0CXF8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BC035044E0CXF8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
BC035044E0CXF8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BC035044E0CXF8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BC035044E0CXF8 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.63■□□□□ 0.73
BC035044E0CXF8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BC035044E0CXF8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BC035044E0CXF8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BC035044E0CXF8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BC035044E0CXF8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BC035044E0CXF8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BC035044E0CXF8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.62■□□□□ 0.73
BC035044E0CXF8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BC035044E0CXF8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BC035044E0CXF8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BC035044E0CXF8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BC035044E0CXF8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BC035044E0CXF8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BC035044E0CXF8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BC035044E0CXF8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BC035044E0CXF8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BC035044E0CXF8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BC035044E0CXF8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BC035044E0CXF8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.59■□□□□ 0.73
BC035044E0CXF8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BC035044E0CXF8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BC035044E0CXF8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
BC035044E0CXF8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
BC035044E0CXF8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BC035044E0CXF8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BC035044E0CXF8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BC035044E0CXF8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BC035044E0CXF8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BC035044E0CXF8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
BC035044E0CXF8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BC035044E0CXF8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BC035044E0CXF8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BC035044E0CXF8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BC035044E0CXF8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.56■□□□□ 0.72
BC035044E0CXF8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BC035044E0CXF8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BC035044E0CXF8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
BC035044E0CXF8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.54■□□□□ 0.72
BC035044E0CXF8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
BC035044E0CXF8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BC035044E0CXF8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BC035044E0CXF8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BC035044E0CXF8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
BC035044E0CXF8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BC035044E0CXF8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BC035044E0CXF8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
BC035044E0CXF8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BC035044E0CXF8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BC035044E0CXF8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BC035044E0CXF8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BC035044E0CXF8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BC035044E0CXF8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BC035044E0CXF8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BC035044E0CXF8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BC035044E0CXF8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BC035044E0CXF8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BC035044E0CXF8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
BC035044E0CXF8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
BC035044E0CXF8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BC035044E0CXF8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BC035044E0CXF8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BC035044E0CXF8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BC035044E0CXF8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BC035044E0CXF8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BC035044E0CXF8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.48■□□□□ 0.71
BC035044E0CXF8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.48■□□□□ 0.71
BC035044E0CXF8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
BC035044E0CXF8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.48■□□□□ 0.71
BC035044E0CXF8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BC035044E0CXF8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms