Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv29A0A0G2LB96 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trbv29A0A0G2LB96 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv29A0A0G2LB96 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.05■□□□□ 0.64
Trbv29A0A0G2LB96 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trbv29A0A0G2LB96 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv29A0A0G2LB96 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv29A0A0G2LB96 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv29A0A0G2LB96 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv29A0A0G2LB96 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv29A0A0G2LB96 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv29A0A0G2LB96 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Trbv29A0A0G2LB96 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv29A0A0G2LB96 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv29A0A0G2LB96 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.01■□□□□ 0.63
Trbv29A0A0G2LB96 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv29A0A0G2LB96 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.01■□□□□ 0.63
Trbv29A0A0G2LB96 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv29A0A0G2LB96 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv29A0A0G2LB96 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trbv29A0A0G2LB96 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv29A0A0G2LB96 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv29A0A0G2LB96 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trbv29A0A0G2LB96 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Trbv29A0A0G2LB96 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv29A0A0G2LB96 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv29A0A0G2LB96 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv29A0A0G2LB96 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv29A0A0G2LB96 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv29A0A0G2LB96 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.99■□□□□ 0.63
Trbv29A0A0G2LB96 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv29A0A0G2LB96 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv29A0A0G2LB96 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.98■□□□□ 0.63
Trbv29A0A0G2LB96 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv29A0A0G2LB96 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv29A0A0G2LB96 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv29A0A0G2LB96 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv29A0A0G2LB96 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv29A0A0G2LB96 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trbv29A0A0G2LB96 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv29A0A0G2LB96 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv29A0A0G2LB96 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv29A0A0G2LB96 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.96■□□□□ 0.63
Trbv29A0A0G2LB96 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv29A0A0G2LB96 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv29A0A0G2LB96 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv29A0A0G2LB96 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv29A0A0G2LB96 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv29A0A0G2LB96 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.95■□□□□ 0.62
Trbv29A0A0G2LB96 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trbv29A0A0G2LB96 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv29A0A0G2LB96 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv29A0A0G2LB96 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv29A0A0G2LB96 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trbv29A0A0G2LB96 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv29A0A0G2LB96 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.93■□□□□ 0.62
Trbv29A0A0G2LB96 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv29A0A0G2LB96 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv29A0A0G2LB96 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv29A0A0G2LB96 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv29A0A0G2LB96 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv29A0A0G2LB96 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trbv29A0A0G2LB96 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv29A0A0G2LB96 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.91■□□□□ 0.62
Trbv29A0A0G2LB96 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv29A0A0G2LB96 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv29A0A0G2LB96 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv29A0A0G2LB96 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv29A0A0G2LB96 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv29A0A0G2LB96 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trbv29A0A0G2LB96 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv29A0A0G2LB96 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv29A0A0G2LB96 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv29A0A0G2LB96 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv29A0A0G2LB96 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Trbv29A0A0G2LB96 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv29A0A0G2LB96 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv29A0A0G2LB96 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv29A0A0G2LB96 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv29A0A0G2LB96 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv29A0A0G2LB96 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv29A0A0G2LB96 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv29A0A0G2LB96 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv29A0A0G2LB96 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trbv29A0A0G2LB96 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trbv29A0A0G2LB96 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trbv29A0A0G2LB96 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv29A0A0G2LB96 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv29A0A0G2LB96 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trbv29A0A0G2LB96 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trbv29A0A0G2LB96 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.87■□□□□ 0.61
Trbv29A0A0G2LB96 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms