Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdv1A0A075B657 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trdv1A0A075B657 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdv1A0A075B657 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdv1A0A075B657 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdv1A0A075B657 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdv1A0A075B657 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trdv1A0A075B657 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Trdv1A0A075B657 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trdv1A0A075B657 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.46■□□□□ 0.39
Trdv1A0A075B657 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trdv1A0A075B657 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trdv1A0A075B657 Gm9397-201ENSMUST00000200125 605 ntBASIC17.46■□□□□ 0.39
Trdv1A0A075B657 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv1A0A075B657 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv1A0A075B657 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.45■□□□□ 0.38
Trdv1A0A075B657 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv1A0A075B657 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv1A0A075B657 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv1A0A075B657 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.44■□□□□ 0.38
Trdv1A0A075B657 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv1A0A075B657 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.44■□□□□ 0.38
Trdv1A0A075B657 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdv1A0A075B657 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trdv1A0A075B657 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.43■□□□□ 0.38
Trdv1A0A075B657 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdv1A0A075B657 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdv1A0A075B657 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Trdv1A0A075B657 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdv1A0A075B657 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv1A0A075B657 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv1A0A075B657 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv1A0A075B657 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trdv1A0A075B657 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.42■□□□□ 0.38
Trdv1A0A075B657 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv1A0A075B657 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trdv1A0A075B657 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trdv1A0A075B657 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trdv1A0A075B657 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdv1A0A075B657 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trdv1A0A075B657 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdv1A0A075B657 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdv1A0A075B657 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trdv1A0A075B657 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdv1A0A075B657 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trdv1A0A075B657 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.39■□□□□ 0.37
Trdv1A0A075B657 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdv1A0A075B657 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdv1A0A075B657 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdv1A0A075B657 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trdv1A0A075B657 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdv1A0A075B657 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdv1A0A075B657 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trdv1A0A075B657 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.37■□□□□ 0.37
Trdv1A0A075B657 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trdv1A0A075B657 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.37■□□□□ 0.37
Trdv1A0A075B657 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trdv1A0A075B657 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trdv1A0A075B657 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trdv1A0A075B657 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.35■□□□□ 0.37
Trdv1A0A075B657 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.35■□□□□ 0.37
Trdv1A0A075B657 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trdv1A0A075B657 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdv1A0A075B657 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Trdv1A0A075B657 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.33■□□□□ 0.37
Trdv1A0A075B657 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdv1A0A075B657 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdv1A0A075B657 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.33■□□□□ 0.36
Trdv1A0A075B657 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdv1A0A075B657 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdv1A0A075B657 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdv1A0A075B657 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdv1A0A075B657 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trdv1A0A075B657 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdv1A0A075B657 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trdv1A0A075B657 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdv1A0A075B657 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdv1A0A075B657 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdv1A0A075B657 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv1A0A075B657 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trdv1A0A075B657 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv1A0A075B657 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trdv1A0A075B657 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv1A0A075B657 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.3■□□□□ 0.36
Trdv1A0A075B657 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv1A0A075B657 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdv1A0A075B657 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdv1A0A075B657 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trdv1A0A075B657 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdv1A0A075B657 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdv1A0A075B657 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trdv1A0A075B657 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trdv1A0A075B657 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 257.3 ms