RNA–Protein interactions for RNA: ENST00000550178.1

DYNLL1-208, Transcript of dynein light chain LC8-type 1, human

BASIC

Gene DYNLL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYNLL1-208	ENST00000550178	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	30.72	■■■□□ 2.51	2e-35	■■■■■ 134.2
DYNLL1-208	ENST00000550178	DDX3X	O00571	662 aa	Known RBP eCLIP	29.55	■■■□□ 2.32	1e-33	■■■■□ 20.2
DYNLL1-208	ENST00000550178	EIF3D	O15371	548 aa	Known RBP eCLIP	31.17	■■■□□ 2.58	4e-12	■□□□□ 9.7
DYNLL1-208	ENST00000550178	SF3B1	O75533	1304 aa	Known RBP eCLIP	31.44	■■■□□ 2.62	2e-11	■■■■■ 62
DYNLL1-208	ENST00000550178	ZRANB2	O95218	330 aa	Known RBP eCLIP	28.8	■■■□□ 2.2	2e-9	■□□□□ 10.7
DYNLL1-208	ENST00000550178	RBM15	Q96T37	977 aa	Known RBP eCLIP	28.75	■■■□□ 2.19	2e-8	■□□□□ 9
DYNLL1-208	ENST00000550178	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	46.49	■■■■■ 5.03	2e-8	■■■■■ 26.9
DYNLL1-208	ENST00000550178	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	44.14	■■■■■ 4.66	3e-8	■■■■□ 22.2
DYNLL1-208	ENST00000550178	YBX3	P16989	372 aa	Known RBP eCLIP	37.87	■■■■□ 3.65	9e-8	■■□□□ 11.6
DYNLL1-208	ENST00000550178	PUM1	Q14671	1186 aa	Known RBP eCLIP	29.61	■■■□□ 2.33	1e-7	■□□□□ 9.3
DYNLL1-208	ENST00000550178	RPS3	P23396	243 aa	Known RBP eCLIP	27.9	■■■□□ 2.06	4e-7	■■■■■ 31.2
DYNLL1-208	ENST00000550178	AQR	O60306	1485 aa	Known RBP eCLIP	50.82	■■■■■ 5.73	5e-7	■■■□□ 17.7
DYNLL1-208	ENST00000550178	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	24.44	■■□□□ 1.5	3e-6	■■■□□ 15.9
DYNLL1-208	ENST00000550178	RBM22	Q9NW64	420 aa	Known RBP eCLIP	28.92	■■■□□ 2.22	8e-6	■□□□□ 10.3
DYNLL1-208	ENST00000550178	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	27.18	■■□□□ 1.94	8e-6	■■■■■ 36.8

Retrieved 15 of 15 RNA–protein pairs in 6.8 ms