RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 COMMD3Q9UBI1 195 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 TESMINQ9Y4I5 508 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 COMMD3-BMI1R4GMX3 469 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 SYNGR4O95473 234 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 BRCC3P46736 316 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 FASLGP48023 281 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ACTR1AP61163 376 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 GALK2Q01415 458 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ZNF808Q8N4W9 903 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 POGLUT1Q8NBL1 392 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 COPS8Q99627 209 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 MEMO1Q9Y316 297 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 MFHAS1Q9Y4C4 1052 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 KANTRA0A1W2PQU2 76 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 FGF19O95750 216 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 LRMDAQ9H2I8 198 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ABCD2Q9UBJ2 740 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ELOA3DA6NLF2 546 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 BRINP1O60477 761 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ZNF12P17014 697 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ZNF143P52747 638 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ELOA3BQ3SY89 546 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 TMEM35AQ53FP2 167 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 TMEM220Q6QAJ8 160 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ELOA3Q8NG57 546 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 TUBGCP5Q96RT8 1024 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 TMED9Q9BVK6 235 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 KCTD5Q9NXV2 234 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 USP31Q70CQ4 1352 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 DHRS12A0PJE2 317 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 HCAR3P49019 387 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 AP3S2P59780 193 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 TUBA3CQ13748 450 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 LIPMQ5VYY2 423 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 SMIM30A4D0T7 59 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 PRKCGP05129 697 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 JUPP14923 745 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 HNRNPKP61978 463 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 DCST1Q5T197 706 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ANKRD23Q86SG2 305 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 C16orf58Q96GQ5 468 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 ADAM18Q9Y3Q7 739 aa16.06■□□□□ 0.16
CACNA1A-258ENST00000638029 SPAM1P38567 509 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RABGGTBP53611 331 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 LRRC37A5PQ49AS3 106 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 NPLQ9BXD5 320 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 TMEM134Q9H6X4 195 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RUVBL1Q9Y265 456 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 ZFP37Q9Y6Q3 630 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 FRMPD4Q14CM0 1322 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RPL17P18621 184 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 ZNF398Q8TD17 642 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RBCK1Q9BYM8 510 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 TIMMDC1Q9NPL8 285 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 DIP2BQ9P265 1576 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 WFS1O76024 890 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 SHMT1P34896 483 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 GLUD2P49448 558 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 CDK9P50750 372 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 NR1H2P55055 460 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 NIPAL4Q0D2K0 466 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 KHDC1LQ5JSQ8 128 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 GRPEL2Q8TAA5 225 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 FRS2Q8WU20 508 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 GLYATL1P3A0A0U1RQE8 302 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 NPIPA5E9PKD4 350 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 COX4I1P13073 169 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 IGFBP5P24593 272 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RIOX2Q8IUF8 465 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RCN3Q96D15 328 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 APOLD1Q96LR9 279 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 CARS2Q9HA77 564 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 MED11Q9P086 117 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 NPIPA1Q9UND3 350 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RANBP3LQ86VV4 465 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 TOR1BO14657 336 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 ALADP13716 330 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 ATP5A1P25705 553 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 SLC3A1Q07837 685 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 ENPP2Q13822 863 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 JAGN1Q8N5M9 183 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 RTKNQ9BST9 563 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 SALL1Q9NSC2 1324 aa16.05■□□□□ 0.16
CACNA1A-258ENST00000638029 CTHP32929 405 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 PGM2L1Q6PCE3 622 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 ANKZF1Q9H8Y5 726 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 HAO2Q9NYQ3 351 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 TIMM22Q9Y584 194 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 SLC30A4O14863 429 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 VAMP1P23763 118 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 TAF10Q12962 218 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 GRK1Q15835 563 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 RNF220Q5VTB9 566 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 C3orf33Q6P1S2 294 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 DCLRE1AQ6PJP8 1040 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 MMAAQ8IVH4 418 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 PIWIL2Q8TC59 973 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 CPT1BQ92523 772 aa16.04■□□□□ 0.16
CACNA1A-258ENST00000638029 TNFRSF11BO00300 401 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms