RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TSPAN18Q96SJ8 248 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 H2AFJQ9BTM1 129 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCDC94Q9BW85 323 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 NXF3Q9H4D5 531 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ST6GALNAC4Q9H4F1 302 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PLEKHA4Q9H4M7 779 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZSCAN16Q9H4T2 348 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PREBQ9HCU5 417 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 CD93Q9NPY3 652 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 MRPL17Q9NRX2 175 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 BLOC1S4Q9NUP1 217 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 LARSQ9P2J5 1176 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZNF580Q9UK33 172 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ADAM28Q9UKQ2 775 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 SARDHQ9UL12 918 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 BARX2Q9UMQ3 279 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 A4GNTQ9UNA3 340 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 NAALADL1Q9UQQ1 740 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 LSM4Q9Y4Z0 139 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 HES2Q9Y543 173 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ANAPC1Q9H1A4 1944 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 NUP210Q8TEM1 1887 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 DOCK7Q96N67 2140 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 PTPRDP23468 1912 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 MYH10P35580 1976 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 A0A0U1RQJ8 604 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 SMIM28A0A1B0GU29 152 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 NPIPB11E5RHQ5 1161 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 IFNL4K9M1U5 179 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 WNT9BO14905 357 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 TEX28O15482 410 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 HSPA12AO43301 675 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 TADA2AO75478 443 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 TOM1L1O75674 476 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 PLA2G4BP0C869 781 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 KCNE1P15382 129 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 EPCAMP16422 314 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 PAX3P23760 479 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 CHATP28329 748 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 HOXA9P31269 272 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 DDIT3P35638 169 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 OR1G1P47890 313 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC39A14Q15043 492 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZBTB6Q15916 424 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 KYAT1Q16773 422 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 UPP1Q16831 310 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 SGO1Q5FBB7 561 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZNF324BQ6AW86 544 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 NADSYN1Q6IA69 706 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 INO80CQ6PI98 192 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 DCLRE1AQ6PJP8 1040 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 CD300LGQ6UXG3 332 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 NEK10Q6ZWH5 1172 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 CDR2LQ86X02 465 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 TDRPQ86YL5 185 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 ARMC8Q8IUR7 673 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 TMEM161BQ8NDZ6 487 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 LRRC15Q8TF66 581 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 FBXL8Q96CD0 374 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 KLHL29Q96CT2 875 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZNF570Q96NI8 536 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 FIZ1Q96SL8 496 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC25A18Q9H1K4 315 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 POMKQ9H5K3 350 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 PLEKHA5Q9HAU0 1116 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 MAGEE1Q9HCI5 957 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC38A7Q9NVC3 462 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 OCIAD1Q9NX40 245 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 CISD1Q9NZ45 108 aaKnown RBP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 FBXO2Q9UK22 296 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 MTMR6Q9Y217 621 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 PRG3Q9Y2Y8 225 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 SF3B1O75533 1304 aaKnown RBP eCLIP3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 F5P12259 2224 aa3.62□□□□□ -1.83
CKS1BP3-201ENST00000600888 PATJQ8NI35 1801 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 KIF26AQ9ULI4 1882 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 TTC26A0AVF1 554 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 FRMD3A2A2Y4 597 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 VPS37CA5D8V6 355 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCDC169A6NNP5 214 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 LDLRAD4O15165 306 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC16A4O15374 487 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 BCAT2O15382 392 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 CLDN3O15551 220 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 SEC14L5O43304 696 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 TNFSF14O43557 240 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 TRAPPC3O43617 180 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 STX6O43752 255 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 FAM189A1O60320 539 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 CSPG5O95196 566 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 MMP2P08253 660 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 CLTAP09496 248 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 ATP1A3P13637 1013 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 CYP3A5P20815 502 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 RPL9P32969 192 aaKnown RBP3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 CPOXP36551 454 aa3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 ARL1P40616 181 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP3-201ENST00000600888 GABRB2P47870 512 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms