RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SEC14L1Q92503 715 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 OR6C1Q96RD1 312 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 TSPYL1Q9H0U9 437 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 SYTL2Q9HCH5 934 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 SOHLH2Q9NX45 425 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 PLAGL1Q9UM63 463 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 FRYQ5TBA9 3013 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 MAP1BP46821 2468 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 PIKFYVEQ9Y2I7 2098 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 SLC9B1P1A6NJY1 282 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 ISM1B1AKI9 464 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 F7P08709 466 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 TPBGLP0DKB5 382 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 MAP4P27816 1152 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 GABRB3P28472 473 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 HSD17B2P37059 387 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 ATP1A2P50993 1020 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 FAM45BPQ6NSW5 357 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 SPESP1Q6UW49 350 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 ZDHHC24Q6UX98 284 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 C3orf62Q6ZUJ4 267 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 ZFAND4Q86XD8 727 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 PPP1R3BQ86XI6 285 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 SPACA3Q8IXA5 215 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 OR2L8Q8NGY9 312 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 OR8K5Q8NH50 307 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 FAM45AQ8TCE6 357 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 CD200R1Q8TD46 325 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 HNRNPLLQ8WVV9 542 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 FCRL4Q96PJ5 515 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 CTRCQ99895 268 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 PITPNM3Q9BZ71 974 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 FANCEQ9HB96 536 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 TXNDC16Q9P2K2 825 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 MTRF1LQ9UGC7 380 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 RARRES3Q9UL19 164 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 BTRCQ9Y297 605 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 MED16Q9Y2X0 877 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 VWA7Q9Y334 891 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 NFS1Q9Y697 457 aa16.73■□□□□ 0.27
SHKBP1-212ENST00000596163 APC2O95996 2303 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 ACACAQ13085 2346 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 ZNF839A8K0R7 811 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 ZBTB14O43829 449 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 PSIP1O75475 530 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 SPAG6O75602 509 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 FKBP9O95302 570 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 FGF5P12034 268 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 UGT2B7P16662 529 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 MAGEA4P43358 317 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 SH3BP2P78314 561 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 PDAP1Q13442 181 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 TUBB3Q13509 450 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 TRADDQ15628 312 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 SLC5A12Q1EHB4 618 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 STRA8Q7Z7C7 330 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 RASGRP3Q8IV61 690 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 GPATCH11Q8N954 259 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 OR9A1PQ8NGU1 263 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 NDNQ99608 321 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 WDR70Q9NW82 654 aa16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 TSR3Q9UJK0 312 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 URB1O60287 2271 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-212ENST00000596163 A0A0J9YY10 115 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 ESYT3A0FGR9 886 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 MCM3P25205 808 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 SSTR1P30872 391 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 BDKRB1P46663 353 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 TUBB4BP68371 445 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 CLN3Q13286 438 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 CUL1Q13616 776 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 GRB7Q14451 532 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 HECTD2Q5U5R9 776 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 CAPN12Q6ZSI9 719 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 DTX1Q86Y01 620 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 CPNE9Q8IYJ1 553 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 MYO1HQ8N1T3 1032 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 NOA1Q8NC60 698 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 FBXO15Q8NCQ5 510 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 GIMAP7Q8NHV1 300 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 HMGCLL1Q8TB92 370 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 ASB11Q8WXH4 323 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 TCTN2Q96GX1 697 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 TRAPPC9Q96Q05 1148 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 OR2A14Q96R47 310 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 SLC30A3Q99726 388 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 APMAPQ9HDC9 416 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 FGF21Q9NSA1 209 aa16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 INTS7Q9NVH2 962 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-212ENST00000596163 KIF26BQ2KJY2 2108 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 MT-ND3P03897 115 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 EBLN1P0CF75 366 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 FOLR1P15328 257 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 ITPKBP27987 946 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 IL2P60568 153 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 TLE3Q04726 772 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 ARHGAP19Q14CB8 494 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms