RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CAPN1P07384 714 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 GSTM1P09488 218 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 RAB40ALP0C0E4 278 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 MSL3P1P0C860 447 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 STIP1P31948 543 aaKnown RBP11.46□□□□□ -0.57
GABPB1-206ENST00000543881 RRADP55042 308 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 GSDMDP57764 484 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 GSTM4Q03013 218 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 CDH17Q12864 832 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 SNX1Q13596 522 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 CDHR3Q6ZTQ4 885 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 ZNF534Q76KX8 674 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 TRIM73Q86UV7 250 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 SLC13A5Q86YT5 568 aaPredicted RBP11.46□□□□□ -0.57
GABPB1-206ENST00000543881 DSELQ8IZU8 1212 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 TXLNBQ8N3L3 684 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 DNAAF3Q8N9W5 541 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 FLVCR1-AS1Q8TAF5 88 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 ELMO1Q92556 727 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 MOCOSQ96EN8 888 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 NLNQ9BYT8 704 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 FAM60AQ9NP50 221 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 PCMTD2Q9NV79 361 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 SPHK1Q9NYA1 384 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 C5AR2Q9P296 337 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 B3GNT3Q9Y2A9 372 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.58
GABPB1-206ENST00000543881 FBN2P35556 2912 aa11.46□□□□□ -0.58
GABPB1-206ENST00000543881 CROCCQ5TZA2 2017 aa11.46□□□□□ -0.58
GABPB1-206ENST00000543881 ERI2A8K979 691 aaKnown RBP11.45□□□□□ -0.58
GABPB1-206ENST00000543881 C2orf74A8MZ97 194 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 GOT2P00505 430 aaKnown RBP11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ZSCAN5DPP0CG00 497 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 PRF1P14222 555 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ACVR1Q04771 509 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ATP1A4Q13733 1029 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 SEMA3AQ14563 771 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 SIX1Q15475 284 aaPredicted RBP11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ZIC1Q15915 447 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 SEL1L2Q5TEA6 688 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 VWA5B1Q5TIE3 1220 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ZNF449Q6P9G9 518 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 UNC5AQ6ZN44 842 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ZBTB2Q8N680 514 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 CPT1BQ92523 772 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 MARVELD3Q96A59 401 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ALS2CR12Q96Q35 445 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 OR2A14Q96R47 310 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 RAB6BQ9NRW1 208 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 GUCA1BQ9UMX6 200 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ZNF148Q9UQR1 794 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 ASF1AQ9Y294 204 aa11.45□□□□□ -0.58
GABPB1-206ENST00000543881 HEATR9A2RTY3 570 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 H3BMH7 237 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 HNRNPRO43390 633 aaKnown RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 KRT38O76015 456 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 FTH1P02794 183 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 CTSBP07858 339 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 UGT2B7P16662 529 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 ADRA1DP25100 572 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 CCR7P32248 378 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 FDFT1P37268 417 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 GABRA4P48169 554 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 KYNUQ16719 465 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 KCTD19Q17RG1 926 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 PTCHD3Q3KNS1 767 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 MEI1Q5TIA1 1274 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 SPESP1Q6UW49 350 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 FAM198BQ6UWH4 519 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 VRK3Q8IV63 474 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 TBC1D21Q8IYX1 336 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 LKAAEAR1Q8TD35 194 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 CLIP3Q96DZ5 547 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 SGSM3Q96HU1 749 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 FRMD8P1Q9BZ68 369 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 ACTR5Q9H9F9 607 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 FANCEQ9HB96 536 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 SYTL2Q9HCH5 934 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 RIMKLBQ9ULI2 386 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 PLAGL1Q9UM63 463 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 CDYLQ9Y232 598 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 COPG1Q9Y678 874 aaKnown RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 PCSK5Q92824 1860 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 C2CD3Q4AC94 2353 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 DIDO1Q9BTC0 2240 aaKnown RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 ARHGAP10A1A4S6 786 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 IQCF5A8MTL0 148 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 E7EVH7 732 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 QSOX1O00391 747 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 ZNF749O43361 778 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 CHRM5P08912 532 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 OR56A5P0C7T3 313 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 CYP2A7P20853 494 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 PEBP1P30086 187 aaKnown RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 SHMT2P34897 504 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 RPL22P35268 128 aaKnown RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 CSE1LP55060 971 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms