RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TMEM26Q6ZUK4 368 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 SPRED2Q7Z698 418 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 NXPE1Q8N323 547 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 SCAIQ8N9R8 606 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 ADAMTS16Q8TE57 1224 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 TANKQ92844 425 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 CHID1Q9BWS9 393 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 NAA50Q9GZZ1 169 aaKnown RBP14.45□□□□□ -0.1
DDX55-209ENST00000542286 ATG10Q9H0Y0 220 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 GNPTGQ9UJJ9 305 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 TMPRSS11EQ9UL52 423 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 CORINQ9Y5Q5 1042 aa14.45□□□□□ -0.1
DDX55-209ENST00000542286 AQP12BA6NM10 295 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 NEDD8-MDP1E9PL57 170 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 LEFTY2O00292 366 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 EPORP19235 508 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 ITPKAP23677 461 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 TACR1P25103 407 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 MAPK10P53779 464 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 NKG7Q16617 165 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 RGS21Q2M5E4 152 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 PRMT9Q6P2P2 845 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 AQP12AQ8IXF9 295 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 STK40Q8N2I9 435 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 ARL10Q8N8L6 244 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 TRPV3Q8NET8 790 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 DUS3LQ96G46 650 aaKnown RBP14.44□□□□□ -0.1
DDX55-209ENST00000542286 EGLN2Q96KS0 407 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 THUMPD3Q9BV44 507 aaKnown RBP14.44□□□□□ -0.1
DDX55-209ENST00000542286 ATP13A3Q9H7F0 1226 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 MRGBPQ9NV56 204 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 TMEM39AQ9NV64 488 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 DLGAP4Q9Y2H0 992 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 VCANP13611 3396 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 OXSR1O95747 527 aaPredicted RBP14.44□□□□□ -0.1
DDX55-209ENST00000542286 SPAM1P38567 509 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 BNIP2Q12982 314 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 ITGADQ13349 1161 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 CRY1Q16526 586 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 ANKRD26P1Q6NSI1 321 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 TCEAL8Q8IYN2 117 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 SLC15A4Q8N697 577 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 OR2AP1Q8NGE2 309 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 ZNF420Q8TAQ5 688 aaPredicted RBP14.44□□□□□ -0.1
DDX55-209ENST00000542286 MRPS31Q92665 395 aaKnown RBP14.44□□□□□ -0.1
DDX55-209ENST00000542286 CGREF1Q99674 301 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 DOK1Q99704 481 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 CD244Q9BZW8 370 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 HPS4Q9NQG7 708 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 ARL15Q9NXU5 204 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 SPG21Q9NZD8 308 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 ANAPC2Q9UJX6 822 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 TMEM98Q9Y2Y6 226 aa14.44□□□□□ -0.1
DDX55-209ENST00000542286 OBSL1O75147 1896 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 AREL1O15033 823 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 OTCP00480 354 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 CCL5P13501 91 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 DCKP27707 260 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 MNX1P50219 401 aaPredicted RBP14.43□□□□□ -0.1
DDX55-209ENST00000542286 KCNC4Q03721 635 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 RAB39AQ14964 217 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 GALNT10Q86SR1 603 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 LILRA3Q8N6C8 439 aaPredicted RBP14.43□□□□□ -0.1
DDX55-209ENST00000542286 PDPRQ8NCN5 879 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 CYB5D2Q8WUJ1 264 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 ISG20Q96AZ6 181 aaKnown RBP14.43□□□□□ -0.1
DDX55-209ENST00000542286 ULK4Q96C45 1275 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 TSSK3Q96PN8 268 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 BBS2Q9BXC9 721 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 SLC25A37Q9NYZ2 338 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 ZIM2Q9NZV7 527 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.43□□□□□ -0.1
DDX55-209ENST00000542286 PCDHB1Q9Y5F3 818 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 TMEM202A6NGA9 273 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 IGSF6O95976 241 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 C8AP07357 584 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 ZNF182P17025 639 aaPredicted RBP14.43□□□□□ -0.1
DDX55-209ENST00000542286 DGKAP23743 735 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 RFC2P35250 354 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 RGS4P49798 205 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 PHC1P78364 1004 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 EMX2Q04743 252 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 MERTKQ12866 999 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 IMPG1Q17R60 797 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 TMC8Q8IU68 726 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 HID1Q8IV36 788 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 MSRB3Q8IXL7 192 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 SGCDQ92629 289 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 CENPNQ96H22 339 aaPredicted RBP14.43□□□□□ -0.1
DDX55-209ENST00000542286 YME1L1Q96TA2 773 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 LSM7Q9UK45 103 aaKnown RBP14.43□□□□□ -0.1
DDX55-209ENST00000542286 OARD1Q9Y530 152 aa14.43□□□□□ -0.1
DDX55-209ENST00000542286 SCN8AQ9UQD0 1980 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 OR2AG2A6NM03 316 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 PRAMEF4O60810 478 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ULK1O75385 1050 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 OLFM2O95897 454 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 SERPINA4P29622 427 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 RPIAP49247 311 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 NTHL1P78549 312 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms