RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PRSS56P0CW18 603 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 SLC2A4P14672 509 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 HOXB9P17482 250 aaPredicted RBP17.37■□□□□ 0.37
NUP54-205ENST00000507257 CTSKP43235 329 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 CAMK2BQ13554 666 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 GTF2H2Q13888 395 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 SIM2Q14190 667 aaPredicted RBP17.37■□□□□ 0.37
NUP54-205ENST00000507257 GALNT3Q14435 633 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 UPP1Q16831 310 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 TTLL9Q3SXZ7 439 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 ALFQ53S48 1182 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 CARD16Q5EG05 197 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 CACHD1Q5VU97 1274 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 GTF2H2CQ6P1K8 395 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 ADAMTSL2Q86TH1 951 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 METTL4Q8N3J2 472 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 IL17RDQ8NFM7 739 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 KBTBD8Q8NFY9 601 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 FAM120BQ96EK7 910 aaKnown RBP17.37■□□□□ 0.37
NUP54-205ENST00000507257 GAD1Q99259 594 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 NMUR1Q9HB89 426 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 CACNG4Q9UBN1 327 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 RAPGEFL1Q9UHV5 662 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 PEX16Q9Y5Y5 336 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 U3KQV3 271 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 PNMA8CA0A1B0GUJ8 204 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 A8MU76 341 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 RAMP2O60895 175 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 ARHGEF15O94989 841 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 MED26O95402 600 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 SEMG1P04279 462 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 LCKP06239 509 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 HOXA9P31269 272 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 S100A5P33763 92 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 NR4A2P43354 598 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 TRPC1P48995 793 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 LIMK1P53667 647 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 RPL38P63173 70 aaKnown RBP17.36■□□□□ 0.37
NUP54-205ENST00000507257 FBXO43Q4G163 708 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 SPANXN4Q5MJ08 99 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 CTSL3PQ5NE16 218 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 CCBE1Q6UXH8 406 aaPredicted RBP17.36■□□□□ 0.37
NUP54-205ENST00000507257 TRIM46Q7Z4K8 759 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 GALNT5Q7Z7M9 940 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 EEF1AKMT1Q8WVE0 214 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 ESAMQ96AP7 390 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 PYCR2Q96C36 320 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 EMILIN2Q9BXX0 1053 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 CCDC177Q9NQR7 707 aaPredicted RBP17.36■□□□□ 0.37
NUP54-205ENST00000507257 RNF6Q9Y252 685 aa17.36■□□□□ 0.37
NUP54-205ENST00000507257 ZBBXA8MT70 800 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 WBP4O75554 376 aaKnown RBP17.35■□□□□ 0.37
NUP54-205ENST00000507257 SPNP16150 400 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 MAGEA11P43364 429 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 PGFP49763 221 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 ELP6Q0PNE2 266 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 PTGR1Q14914 329 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 AAK1Q2M2I8 961 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 TOR1AIP1Q5JTV8 583 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.35■□□□□ 0.37
NUP54-205ENST00000507257 ZNF544Q6NX49 715 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 FAHD1Q6P587 224 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 GCNT7Q6ZNI0 430 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 CEP68Q76N32 757 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 CLIP4Q8N3C7 705 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 PARP16Q8N5Y8 322 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 SIDT2Q8NBJ9 832 aaKnown RBP17.35■□□□□ 0.37
NUP54-205ENST00000507257 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 CDADC1Q9BWV3 514 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 TNKS2Q9H2K2 1166 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 PDFQ9HBH1 243 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 IL37Q9NZH6 218 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 TBKBP1A7MCY6 615 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 NIPSNAP2O75323 286 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 APOA1P02647 267 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 KRT8P05787 483 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 GGT5P36269 586 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 LIPAP38571 399 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 GNPDA1P46926 289 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 PXNP49023 591 aaPredicted RBP17.35■□□□□ 0.37
NUP54-205ENST00000507257 MAPKAPK2P49137 400 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 TBX4P57082 545 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 TEKQ02763 1124 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 ZNF235Q14590 738 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 METTL2BQ6P1Q9 378 aaKnown RBP17.35■□□□□ 0.37
NUP54-205ENST00000507257 GDPD3Q7L5L3 318 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 SLC46A3Q7Z3Q1 461 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 FAM9CQ8IZT9 166 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 TMEM132CQ8N3T6 1108 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 NUDT8Q8WV74 236 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 ITCHQ96J02 903 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 OR52E6Q96RD3 313 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 RAD9AQ99638 391 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 CCDC32Q9BV29 185 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 ABHD16BQ9H3Z7 469 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 ZBTB20Q9HC78 741 aaPredicted RBP17.35■□□□□ 0.37
NUP54-205ENST00000507257 GRIP1Q9Y3R0 1128 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 ARIH1Q9Y4X5 557 aaPredicted RBP17.35■□□□□ 0.37
NUP54-205ENST00000507257 GREB1Q4ZG55 1949 aa17.35■□□□□ 0.37
NUP54-205ENST00000507257 CHD5Q8TDI0 1954 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms