RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NACAP1Q9BZK3 213 aa4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 RANBP17Q9H2T7 1088 aaKnown RBP4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 TLE6Q9H808 572 aa4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 FKRPQ9H9S5 495 aa4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 STX8Q9UNK0 236 aa4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 DDX49Q9Y6V7 483 aaKnown RBP4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 LCTP09848 1927 aa4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 FRYLO94915 3013 aa4.63□□□□□ -1.67
HMGB3P5-201ENST00000428894 ATG2AQ2TAZ0 1938 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 KMT2BQ9UMN6 2715 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 TSPY2A6NKD2 308 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 USP17L23D6RBM5 183 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 WDR1O75083 606 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 EIF3JO75822 258 aaKnown RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 HOXB8P17481 243 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 TERF1P54274 439 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 EEF1A1P68104 462 aaKnown RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 ARHGAP1Q07960 439 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 TRPC3Q13507 836 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 EEF1A1P5Q5VTE0 462 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 TMEM184AQ6ZMB5 413 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 PCDH20Q8N6Y1 951 aaKnown RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 TMEM105Q8N8V8 129 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 PPTC7Q8NI37 304 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 SUSD6Q92537 303 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 PIGTQ969N2 578 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZNF689Q96CS4 500 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 KLHL29Q96CT2 875 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZNF501Q96CX3 271 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 ORAI1Q96D31 301 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 HVCN1Q96D96 273 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 NECTIN4Q96NY8 510 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 RTP3Q9BQQ7 232 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 POLR3CQ9BUI4 534 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 BOLA2Q9H3K6 86 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 IL1RAPL2Q9NP60 686 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 MPP6Q9NZW5 540 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 TBX20Q9UMR3 447 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 FAF1Q9UNN5 650 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 EXOC6BQ9Y2D4 811 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 ADGRA3Q8IWK6 1321 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 PLIN4Q96Q06 1357 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 ACACBO00763 2458 aa4.62□□□□□ -1.67
HMGB3P5-201ENST00000428894 CFAP47Q6ZTR5 3102 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 LDLRAD4O15165 306 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 EDIL3O43854 480 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 HMMRO75330 724 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 PRDM1O75626 825 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 PDGFBP01127 241 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 EGFP01133 1207 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZFYP08048 801 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 HOXB5P09067 269 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 STAG3L1P0CL83 205 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 NRIP1P48552 1158 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 SNAP25P60880 206 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 VAMP2P63027 116 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 CSNK2A1P68400 391 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 FOXM1Q08050 763 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 ANGPT1Q15389 498 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 COL28A1Q2UY09 1125 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 ARHGEF16Q5VV41 709 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZNF280DQ6N043 979 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 SLC46A3Q7Z3Q1 461 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 CREBRFQ8IUR6 639 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 WDSUB1Q8N9V3 476 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 CSNK2A3Q8NEV1 391 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 HMGCLL1Q8TB92 370 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 ATP8B4Q8TF62 1192 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 SCLT1Q96NL6 688 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 FTHL17Q9BXU8 183 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 FAM118AQ9NWS6 357 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 DDX43Q9NXZ2 648 aaKnown RBP4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 KCND2Q9NZV8 630 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 BARX2Q9UMQ3 279 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 DGKBQ9Y6T7 804 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 WDR19Q8NEZ3 1342 aa4.61□□□□□ -1.67
HMGB3P5-201ENST00000428894 CHD8Q9HCK8 2581 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 BAHCC1Q9P281 2608 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 MYH6P13533 1939 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZFHX4Q86UP3 3567 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 SEC31AO94979 1220 aaKnown RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 CSPG5O95196 566 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 LDLRP01130 860 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 HSPD1P10809 573 aaKnown RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 AOC1P19801 751 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 HOXA1P49639 335 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZNF234Q14588 700 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 CELF3Q5SZQ8 465 aaKnown RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 SPOUT1Q5T280 376 aaKnown RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 SIGIRRQ6IA17 410 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 TTI2Q6NXR4 508 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 PQLC2Q6ZP29 291 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 NME8Q8N427 588 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 RHBDF1Q96CC6 855 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 GRAMD2BQ96HH9 432 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 SPATA33Q96N06 139 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 QRFPRQ96P65 431 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 F2RL3Q96RI0 385 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms