RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 CATSPER3Q86XQ3 398 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 SLC13A5Q86YT5 568 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 JAMLQ86YT9 394 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 PHC2Q8IXK0 858 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ZZZ3Q8IYH5 903 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TMEM199Q8N511 208 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 C12orf45Q8N5I9 185 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ATPAF2Q8N5M1 289 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 FANCBQ8NB91 859 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 PAPD5Q8NDF8 572 aaKnown RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 DNAAF1Q8NEP3 725 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 OR2L5Q8NG80 312 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 OR6X1Q8NH79 312 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 OR2W6PQ8NHA6 318 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 RP9Q8TA86 221 aaKnown RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 STK35Q8TDR2 534 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 DEDD2Q8WXF8 326 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ST8SIA4Q92187 359 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 FCGR1BQ92637 280 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TFAP2CQ92754 450 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 RBPMSQ93062 196 aaKnown RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 MARC2Q969Z3 335 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ISL2Q96A47 359 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TRIM43Q96BQ3 446 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF669Q96BR6 464 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 CCDC124Q96CT7 223 aaKnown RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 RNF31Q96EP0 1072 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 FOPNLQ96NB1 174 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF558Q96NG5 402 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 CAMK1GQ96NX5 476 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 CPXM1Q96SM3 734 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 UHRF1Q96T88 793 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 PKP4Q99569 1192 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 KCTD14Q9BQ13 255 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 SEC22CQ9BRL7 303 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TMEM175Q9BSA9 504 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 DCUN1D5Q9BTE7 237 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 HTATIP2Q9BUP3 242 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 SPATA9Q9BWV2 254 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 BRIP1Q9BX63 1249 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 C1QTNF1Q9BXJ1 281 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TRIM9Q9C026 710 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 KCNH6Q9H252 994 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 NANOGQ9H9S0 305 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 CYP3A43Q9HB55 503 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TCF7L1Q9HCS4 588 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 GSN-AS1Q9NRJ2 163 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 FAM207AQ9NSI2 230 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 CCM2LQ9NUG4 571 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ELOVL2Q9NXB9 296 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TAS2R9Q9NYW1 312 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF224Q9NZL3 707 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 PSMC3IPQ9P2W1 217 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 SPASTQ9UBP0 616 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 RGS17Q9UGC6 210 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 APOBEC3BQ9UH17 382 aaKnown RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 UBQLN2Q9UHD9 624 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 MBD1Q9UIS9 605 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 DBR1Q9UK59 544 aaKnown RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TNNQ9UQP3 1299 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 POMPQ9Y244 141 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TP53TG5Q9Y2B4 290 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 PTPN22Q9Y2R2 807 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 POLR3HQ9Y535 204 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 PCDHGA9Q9Y5G4 932 aaKnown RBP3.54□□□□□ -1.84
XRCC4-203ENST00000396027 TNFRSF18Q9Y5U5 241 aa3.54□□□□□ -1.84
XRCC4-203ENST00000396027 ADGRF5Q8IZF2 1346 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 RPTORQ8N122 1335 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 ATRNO75882 1429 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 DCCP43146 1447 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 DNAJC25-GNG10A0A024R161 153 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 A0A0G2JND7 137 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 C2orf92A0A1B0GVN3 265 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 GNG14A0A1W2PPG7 69 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 A0A1W2PPW3 197 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 MTMR11A4FU01 709 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 LRRC14BA6NHZ5 514 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 CLDN24A6NM45 220 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 ARHGEF33A8MVX0 844 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 NUDT19A8MXV4 375 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 FOXO6A8MYZ6 492 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 J3KRW8 73 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 FCHO1O14526 889 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF213O14771 459 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 B4GAT1O43505 415 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 PRKYO43930 277 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 NOBOXO60393 691 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 PLIN3O60664 434 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 JAK2O60674 1132 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 GGCTO75223 188 aaKnown RBP3.53□□□□□ -1.84
XRCC4-203ENST00000396027 TADA2AO75478 443 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 RFPL3O75679 317 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 BCAS2O75934 225 aaPredicted RBP3.53□□□□□ -1.84
XRCC4-203ENST00000396027 GABARAPO95166 117 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 ATE1O95260 518 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 OTCP00480 354 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 GOT2P00505 430 aaKnown RBP3.53□□□□□ -1.84
XRCC4-203ENST00000396027 ADAP00813 363 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 POMCP01189 267 aa3.53□□□□□ -1.84
XRCC4-203ENST00000396027 IGHV2-70P01814 119 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms