RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 DIO3P55073 304 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 TPD52P55327 224 aaPredicted RBP16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 ZNF678Q5SXM1 525 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 MSANTD2Q6P1R3 559 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 TRAF7Q6Q0C0 670 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 NODALQ96S42 347 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 POLR1EQ9GZS1 481 aaKnown RBP16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 NPAP1Q9NZP6 1156 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 INVSQ9Y283 1065 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 MN1Q10571 1320 aaPredicted RBP16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 MROH6A6NGR9 719 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 MEN1O00255 615 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 BNIP3LO60238 219 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 NBNO60934 754 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 RHOBTB1O94844 696 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 KLKB1P03952 638 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 CTPS1P17812 591 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 OR2B6P58173 313 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 GABARAPL2P60520 117 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 FRG1Q14331 258 aaKnown RBP16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 PAF1Q8N7H5 531 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 CD99L2Q8TCZ2 262 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 FAR1Q8WVX9 515 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 AUTS2Q8WXX7 1259 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 ZNF300Q96RE9 604 aaPredicted RBP16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 NARFLQ9H6Q4 476 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 TLR8Q9NR97 1041 aaKnown RBP16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 ABCD2Q9UBJ2 740 aa16.95■□□□□ 0.3
LDLRAP1-201ENST00000374338 NPEPPSL1A6NEC2 478 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 CDK14O94921 469 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 HSD17B1P14061 328 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 CD1DP15813 335 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 IL12AP29459 219 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 OR1D2P34982 312 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 NUDT1P36639 197 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 HTR2BP41595 481 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 CTU2Q2VPK5 515 aaKnown RBP16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 YIF1BQ5BJH7 314 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 PSAPL1Q6NUJ1 521 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 ZNF438Q7Z4V0 828 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 DTX3Q8N9I9 347 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 SIDT2Q8NBJ9 832 aaKnown RBP16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 OR4L1Q8NH43 312 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 MCFD2Q8NI22 146 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 BIRC7Q96CA5 298 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 TUBGCP3Q96CW5 907 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 C1orf74Q96LT6 269 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 ASPSCR1Q9BZE9 553 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 PRKD2Q9BZL6 878 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 SYTL2Q9HCH5 934 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 PAK1IP1Q9NWT1 392 aaPredicted RBP16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 MARCH5Q9NX47 278 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 C12orf71A8MTZ7 269 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 CAPN1P07384 714 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 CLCN5P51795 746 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 ARSFP54793 590 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 EMX1Q04741 257 aaPredicted RBP16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 LARP4Q71RC2 724 aaKnown RBP eCLIP16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 TBC1D21Q8IYX1 336 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 ROPN1LQ96C74 230 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 LRRC58Q96CX6 371 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 CDKN2AIPNLQ96HQ2 116 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 GPR21Q99679 349 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 GDF15Q99988 308 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 AIFM2Q9BRQ8 373 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 ATP13A1Q9HD20 1204 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 STARD7Q9NQZ5 370 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 DNMT3LQ9UJW3 386 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 UTS2RQ9UKP6 389 aa16.94■□□□□ 0.3
LDLRAP1-201ENST00000374338 A0A1W2PQ72 361 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 C2orf78A6NCI8 922 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 FAM25AB3EWG3 89 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 FAM25CB3EWG5 89 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 FAM25GB3EWG6 89 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 F5H5T6 163 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 SNX2O60749 519 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 DNAJB2P25686 324 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 S100A5P33763 92 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 TRIP4Q15650 581 aaPredicted RBP16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 FAM205BPQ63HN1 556 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 LAIR2Q6ISS4 152 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 RNF180Q86T96 592 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 RBM23Q86U06 439 aaKnown RBP16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 NLGN4XQ8N0W4 816 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 RPL3LQ92901 407 aaKnown RBP16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 C19orf60Q96EN9 201 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 UROC1Q96N76 676 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 RHNO1Q9BSD3 238 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 TM6SF2Q9BZW4 377 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 TUBB1Q9H4B7 451 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 CATSPERZQ9NTU4 200 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 TOR4AQ9NXH8 423 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 FKBPLQ9UIM3 349 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 PABPN1LA6NDY0 278 aaKnown RBP16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 K7ERQ8 282 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 SSX4O60224 188 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 NPHS1O60500 1241 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 THRBP10828 461 aa16.93■□□□□ 0.3
LDLRAP1-201ENST00000374338 MTHFD2P13995 350 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms