RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 LINGO1Q96FE5 620 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 SLC47A1Q96FL8 570 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 MROQ9BYG7 248 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 WDR12Q9GZL7 423 aaKnown RBP11.26□□□□□ -0.61
DDB1-224ENST00000545894 LTB4R2Q9NPC1 389 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.611e-10■■■■□ 19.9
DDB1-224ENST00000545894 ABI2Q9NYB9 513 aaPredicted RBP11.26□□□□□ -0.61
DDB1-224ENST00000545894 LIMD1Q9UGP4 676 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 NEUROG3Q9Y4Z2 214 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 CPQQ9Y646 472 aa11.26□□□□□ -0.61
DDB1-224ENST00000545894 PTPRDP23468 1912 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 KRBA1A5PL33 1030 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 UGT2B11O75310 529 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 VNN2O95498 520 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 UGT2B4P06133 528 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 CAPN1P07384 714 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 HTR6P50406 440 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 RAD23AP54725 363 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 NKG7Q16617 165 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 ZNF697Q5TEC3 545 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 PDE12Q6L8Q7 609 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 GLT6D1Q7Z4J2 308 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 ADGRD2Q7Z7M1 963 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 EEF1AKMT1Q8WVE0 214 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 MRPL38Q96DV4 380 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 ALPK1Q96QP1 1244 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 NODALQ96S42 347 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 FBXO44Q9H4M3 255 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 ACTR8Q9H981 624 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 ATAD3AQ9NVI7 634 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 VAPAQ9P0L0 249 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 ADGRE2Q9UHX3 823 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 C3orf18Q9UK00 162 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 NAALAD2Q9Y3Q0 740 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 POLR3HQ9Y535 204 aaPredicted RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 CDH23Q9H251 3354 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 SLC1A7O00341 560 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 PER2O15055 1255 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 LSM1O15116 133 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 DFNA5O60443 496 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 XYLBO75191 536 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 NIPSNAP2O75323 286 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 AGXTP21549 392 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 NR4A1P22736 598 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 RXRGP48443 463 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 MAPKAPK2P49137 400 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 GP2P55259 537 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 RPS3AP61247 264 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 PLIN5Q00G26 463 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 CREMQ03060 361 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 RAB33AQ14088 237 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 TAF1AQ15573 450 aaPredicted RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 TRIP4Q15650 581 aaPredicted RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 CTF1Q16619 201 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 AP5B1Q2VPB7 878 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 ALG1LQ6GMV1 187 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 LAIR2Q6ISS4 152 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 SPESP1Q6UW49 350 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 LINC00299Q6ZSB3 139 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 PIWIL3Q7Z3Z3 882 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 HS3ST5Q8IZT8 346 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 ZNF548Q8NEK5 533 aaPredicted RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 CD200R1Q8TD46 325 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 RMDN1Q96DB5 314 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 THUMPD3Q9BV44 507 aaKnown RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 EMILIN2Q9BXX0 1053 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 PDFQ9HBH1 243 aa11.25□□□□□ -0.61
DDB1-224ENST00000545894 EVLQ9UI08 416 aaPredicted RBP11.25□□□□□ -0.61
DDB1-224ENST00000545894 LOC100130705A0A1B0GUX0 176 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 ZNF99A8MXY4 864 aaPredicted RBP11.24□□□□□ -0.61
DDB1-224ENST00000545894 PFDN6O15212 129 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 NDUFS2O75306 463 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 INMTO95050 263 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 MSH3P20585 1137 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 CD9P21926 228 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 PCMT1P22061 227 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 GPR15P49685 360 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 CDKN1CP49918 316 aaPredicted RBP11.24□□□□□ -0.61
DDB1-224ENST00000545894 OXCT1P55809 520 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 ISL1P61371 349 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 CYP4F3Q08477 520 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 GPR17Q13304 367 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 LAPTM5Q13571 262 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 DDR2Q16832 855 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 RFTN2Q52LD8 501 aaPredicted RBP11.24□□□□□ -0.61
DDB1-224ENST00000545894 CTSL3PQ5NE16 218 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 ZNF691Q5VV52 312 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 BTLAQ7Z6A9 289 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 MIB1Q86YT6 1006 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 ADHFE1Q8IWW8 467 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 EID3Q8N140 333 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 PIK3C3Q8NEB9 887 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 OR10A6Q8NH74 314 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 NUDT8Q8WV74 236 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 SLC13A3Q8WWT9 602 aa11.24□□□□□ -0.61
DDB1-224ENST00000545894 S100ZQ8WXG8 99 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms