RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ATXN7L3BQ96GX2 97 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 CD180Q99467 661 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 OLFM1Q99784 485 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 STRADBQ9C0K7 418 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 TWSG1Q9GZX9 223 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 ZMYND15Q9H091 742 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 KLK13Q9UKR3 277 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 ADAMTS20P59510 1910 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 SPEGQ15772 3267 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 HGSO14964 777 aaPredicted RBP18.87■□□□□ 0.61
DDX55-207ENST00000540763 RIPK2O43353 540 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 CATP04040 527 aaKnown RBP18.87■□□□□ 0.61
DDX55-207ENST00000540763 TUBBP07437 444 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ANKRD34CP0C6C1 535 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ZNF37AP17032 561 aaPredicted RBP18.87■□□□□ 0.61
DDX55-207ENST00000540763 SLC12A2P55011 1212 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 CLDN6P56747 220 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 IL2P60568 153 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 SP140Q13342 867 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 EFTUD2Q15029 972 aaKnown RBP eCLIP18.87■□□□□ 0.612e-11■■■■■ 32.6
DDX55-207ENST00000540763 PAQR3Q6TCH7 311 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 CYHR1Q6ZMK1 362 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ZNF574Q6ZN55 896 aaPredicted RBP18.87■□□□□ 0.61
DDX55-207ENST00000540763 AMIGO1Q86WK6 493 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ASB11Q8WXH4 323 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ANKRD7Q92527 254 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 NCSTNQ92542 709 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ZDHHC12Q96GR4 267 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 PDLIM5Q96HC4 596 aaKnown RBP18.87■□□□□ 0.61
DDX55-207ENST00000540763 SRMSQ9H3Y6 488 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 SYTL2Q9HCH5 934 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 OR6C2Q9NZP2 312 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ZMIZ1Q9ULJ6 1067 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 ICKQ9UPZ9 632 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 NFS1Q9Y697 457 aa18.87■□□□□ 0.61
DDX55-207ENST00000540763 IGHV5-10-1A0A0J9YXX1 117 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 GFYI3L273 518 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 TSPAN12O95859 305 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 TOP3BO95985 862 aaKnown RBP18.86■□□□□ 0.61
DDX55-207ENST00000540763 C8GP07360 202 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 ITGA2BP08514 1039 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 TYRP1P17643 537 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 PKLRP30613 574 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 PPM1FP49593 454 aaPredicted RBP18.86■□□□□ 0.61
DDX55-207ENST00000540763 RAB28P51157 221 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 TAS2R39P59534 338 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 VSNL1P62760 191 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 PRKAA1Q13131 559 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 PRKG2Q13237 762 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 CAMK2BQ13554 666 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 ZKSCAN8Q15776 578 aaPredicted RBP18.86■□□□□ 0.61
DDX55-207ENST00000540763 UBAP2Q5T6F2 1119 aaKnown RBP18.86■□□□□ 0.61
DDX55-207ENST00000540763 PRSS42Q7Z5A4 293 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 GSPT2Q8IYD1 628 aaKnown RBP18.86■□□□□ 0.61
DDX55-207ENST00000540763 MYO1HQ8N1T3 1032 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 RAB42Q8N4Z0 105 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 NKAPQ8N5F7 415 aaKnown RBP18.86■□□□□ 0.61
DDX55-207ENST00000540763 CFAP61Q8NHU2 1237 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 SLC44A1Q8WWI5 657 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 MENTQ9BUN1 341 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 NRSN2Q9GZP1 204 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 SPATA7Q9P0W8 599 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 FETUBQ9UGM5 382 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 ZNF180Q9UJW8 692 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 TDRKHQ9Y2W6 561 aaKnown RBP18.86■□□□□ 0.61
DDX55-207ENST00000540763 KIF26BQ2KJY2 2108 aa18.86■□□□□ 0.61
DDX55-207ENST00000540763 CCDC187A0A096LP49 1063 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 TMEM8BA6NDV4 472 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 RASGRF2O14827 1237 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 SLC16A5O15375 505 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 CAPN5O15484 640 aaPredicted RBP18.85■□□□□ 0.61
DDX55-207ENST00000540763 WISP3O95389 354 aaPredicted RBP18.85■□□□□ 0.61
DDX55-207ENST00000540763 TPBGLP0DKB5 382 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 HOXB3P14651 431 aaPredicted RBP18.85■□□□□ 0.61
DDX55-207ENST00000540763 STMN1P16949 149 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 GRB7Q14451 532 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 ARMC6Q6NXE6 501 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 ARHGAP22Q7Z5H3 698 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 CCDC91Q7Z6B0 441 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 B3GNT8Q7Z7M8 397 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 KDF1Q8NAX2 398 aaPredicted RBP18.85■□□□□ 0.61
DDX55-207ENST00000540763 OR4E2Q8NGC2 313 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 HMGCLL1Q8TB92 370 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 EEF1AKMT1Q8WVE0 214 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 LINGO1Q96FE5 620 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 CCDC74BQ96LY2 380 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 TMEM121BQ9BXQ6 578 aaPredicted RBP18.85■□□□□ 0.61
DDX55-207ENST00000540763 SEMA6CQ9H3T2 930 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 HRASLS2Q9NWW9 162 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 SEMA5BQ9P283 1151 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 SLC39A10Q9ULF5 831 aa18.85■□□□□ 0.61
DDX55-207ENST00000540763 MTO1Q9Y2Z2 717 aaKnown RBP18.85■□□□□ 0.61
DDX55-207ENST00000540763 FAM149AA5PLN7 773 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 OR6C74A6NCV1 312 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 TLCD2A6NGC4 264 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 ARHGEF33A8MVX0 844 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 MYO1CO00159 1063 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 BTN3A1O00481 513 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 ZBTB14O43829 449 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 INHBAP08476 426 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms