RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HYPKQ9NX55 129 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ARL15Q9NXU5 204 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HSFX1Q9UBD0 423 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 COPG2Q9UBF2 871 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 DHDHQ9UQ10 334 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 STK38LQ9Y2H1 464 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 TMEM184BQ9Y519 407 aaPredicted RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 MAP3K19Q56UN5 1328 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 CENPJQ9HC77 1338 aaPredicted RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 MYO15BQ96JP2 1530 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 UBE2QL1A1L167 161 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 MACROD2A1Z1Q3 448 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 E7ENX8 843 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 CLDN4O14493 209 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 PTGESO14684 152 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 FOXN1O15353 648 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 LRRTM2O43300 516 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 MFAP3LO75121 409 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 POP4O95707 220 aaKnown RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 CSF2P04141 144 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 HMBSP08397 361 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 RALBP11234 206 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 CKMT2P17540 419 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 ATP6V1C1P21283 382 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 GCSHP23434 173 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 CHMLP26374 656 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 PRDX6P30041 224 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 SLC6A6P31641 620 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 NUP62P37198 522 aaPredicted RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 CNN1P51911 297 aaKnown RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 SUCLG1P53597 346 aaKnown RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 MRPS34P82930 218 aaKnown RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 TP53BP2Q13625 1128 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 ARHGEF6Q15052 776 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 WDR43Q15061 677 aaKnown RBP eCLIP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 C6orf141Q5SZD1 244 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 DCST1Q5T197 706 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 PRAMEF7Q5VXH5 474 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 AP1ARQ63HQ0 302 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 AAGABQ6PD74 315 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 KYAT3Q6YP21 454 aaKnown RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 SRRM1Q8IYB3 904 aaKnown RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 FAM9CQ8IZT9 166 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 CENPLQ8N0S6 344 aaPredicted RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 AMER3Q8N944 861 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 SRFBP1Q8NEF9 429 aaKnown RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 UBLCP1Q8WVY7 318 aaPredicted RBP4.83□□□□□ -1.64
GABPB1-204ENST00000396464 FAM46BQ96A09 425 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 RASD2Q96D21 266 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 SPATA33Q96N06 139 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 MS4A10Q96PG2 267 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 TMEM47Q9BQJ4 181 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 FAM192AQ9GZU8 254 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 ATG10Q9H0Y0 220 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 HIPK3Q9H422 1215 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 CPNE5Q9HCH3 593 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 ETNK2Q9NVF9 386 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 MGAT4BQ9UQ53 548 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 B3GNT3Q9Y2A9 372 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 AKNAQ7Z591 1439 aa4.83□□□□□ -1.64
GABPB1-204ENST00000396464 ARHGEF40Q8TER5 1519 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 A0A1W2PN81 502 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 DRGXA6NNA5 263 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 GOLGA8SH3BPF8 625 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 HOXA3O43365 443 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 FAM20BO75063 409 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ATP9AO75110 1047 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 DNAJB6O75190 326 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ERN1O75460 977 aaKnown RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 OTCP00480 354 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 MBPP02686 304 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 PLA2G4BP0C869 781 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 KRT3P12035 628 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 PRKACBP22694 351 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 CHRNA7P36544 502 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 AGTR2P50052 363 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 CHN2P52757 468 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ATP5IP56385 69 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ABATP80404 500 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 EGR4Q05215 589 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 SPOCK1Q08629 439 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 SOWAHAQ2M3V2 549 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 BCL7AQ4VC05 210 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 Q5PR19 223 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ARMC12Q5T9G4 340 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 FAM198BQ6UWH4 519 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 DPY19L3Q6ZPD9 716 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 FAM228AQ86W67 206 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 TMEM173Q86WV6 379 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 SLC43A2Q8N370 569 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ANKRD13CQ8N6S4 541 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 C8orf58Q8NAV2 365 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 OR52J3Q8NH60 311 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 SLC25A43Q8WUT9 341 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 DNAJA4Q8WW22 397 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 IGSF8Q969P0 613 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 NCLNQ969V3 563 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms