RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PARP10Q53GL7 1025 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 HSP90AB3PQ58FF7 597 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 LRRC73Q5JTD7 316 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 SPOUT1Q5T280 376 aaKnown RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 GRTP1Q5TC63 336 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 RAB12Q6IQ22 244 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 FAM122CQ6P4D5 195 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 NHLRC1Q6VVB1 395 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 CCNI2Q6ZMN8 369 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 KCTD9Q7L273 389 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 NUP54Q7Z3B4 507 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 DGLUCYQ7Z3D6 616 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 ANKRD13CQ8N6S4 541 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 OR5M8Q8NGP6 311 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 OR14A16Q8NHC5 309 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 RSPH1Q8WYR4 309 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 SYN2Q92777 582 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 BSCL2Q96G97 398 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 FAM84BQ96KN1 310 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 CSF3RQ99062 836 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 BTBD10Q9BSF8 475 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 EBF3Q9H4W6 596 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 THAP9Q9H5L6 903 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 CDH20Q9HBT6 801 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 AKAP7Q9P0M2 348 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 MTUS1Q9ULD2 1270 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 AMDHD2Q9Y303 409 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 PCDHGA1Q9Y5H4 931 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 PCDHAC2Q9Y5I4 1007 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 PTGDR2Q9Y5Y4 395 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 ELOVL7A1L3X0 281 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 OR5K3A6NET4 321 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 SDR42E2A6NKP2 422 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 OR6C75A6NL08 312 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 ANKRD66B4E2M5 251 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 TNFRSF13BO14836 293 aaPredicted RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 GPR137BO60478 399 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 FCGR3BO75015 233 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 WISP2O76076 250 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 BMP10O95393 424 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 IGHV2-70P01814 119 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 HMOX1P09601 288 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 SPP1P10451 314 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 HOXB2P14652 356 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 KIAA1024LP59773 190 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 SSBP2P81877 361 aaPredicted RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 ARF5P84085 180 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 SRSF4Q08170 494 aaKnown RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 WASHC5Q12768 1159 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 NPRL3Q12980 569 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 CUL3Q13618 768 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 DHX34Q14147 1143 aaKnown RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 LBHQ53QV2 105 aaPredicted RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF789Q5FWF6 425 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF626Q68DY1 528 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 CASC4Q6P4E1 433 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF704Q6ZNC4 412 aaPredicted RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 MRPL10Q7Z7H8 261 aaKnown RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 TMPRSS11BQ86T26 416 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 FAM114A1Q8IWE2 563 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 B4GALNT2Q8NHY0 566 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 PSMA8Q8TAA3 256 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 DENND1AQ8TEH3 1009 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 SSMEM1Q8WWF3 244 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 SEMA4DQ92854 862 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 DAZLQ92904 295 aaKnown RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 STAMBPL1Q96FJ0 436 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 LRMDAQ9H2I8 198 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 Q9N2K0 584 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 KLHL1Q9NR64 748 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 MIOSQ9NXC5 875 aa4.88□□□□□ -1.63
LINC00397-202ENST00000606785 PA2G4Q9UQ80 394 aaKnown RBP4.88□□□□□ -1.63
LINC00397-202ENST00000606785 LY6G6EA0A0G2JKS1 128 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 SMIM30A4D0T7 59 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 DUXAA6NLW8 204 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 INO80B-WBP1J3KQ70 363 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 LUC7L3O95232 432 aaKnown RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 SLC16A8O95907 504 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 P4HA1P13674 534 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 EPCAMP16422 314 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 CD27P26842 260 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 FRKP42685 505 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 RGS7P49802 495 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 MFAP3P55082 362 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 ADARP55265 1226 aaKnown RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 YBEYP58557 167 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 RUNX1T1Q06455 604 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 RPS6KA1Q15418 735 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 EZH2Q15910 746 aaKnown RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 SRSF7Q16629 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 TTC31Q49AM3 519 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 TDRD12Q587J7 1177 aaKnown RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 MTX3Q5HYI7 312 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 MDH1BQ5I0G3 518 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 C8orf82Q6P1X6 216 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 KLC3Q6P597 504 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF517Q6ZMY9 492 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 COLCA1Q6ZS62 124 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 PEX5LQ8IYB4 626 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms