RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MUC6Q6W4X9 2439 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 KMT2EQ8IZD2 1858 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 NOTCH4Q99466 2003 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PHLPP2Q6ZVD8 1323 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 SCN1AP35498 2009 aa3.65□□□□□ -1.82
CKS1BP3-201ENST00000600888 PIEZO1Q92508 2521 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 TEX13CA0A0J9YWL9 993 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCDC189A1A4V9 331 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 ARHGEF35A5YM69 484 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 A6NLC8 198 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 LOC730098B7Z3J9 87 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 H3BQ06 376 aaPredicted RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 J3KR12 359 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 IKBKBO14920 756 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 LINC01565O15544 149 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 KLK8O60259 260 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 USO1O60763 962 aaKnown RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 DDHD2O94830 711 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 VNN2O95498 520 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 POU1F1P28069 291 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCT6AP40227 531 aaKnown RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 NRIP1P48552 1158 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 MXI1P50539 228 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 DSCR9P59020 149 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 SMC1AQ14683 1233 aaKnown RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 IL17AQ16552 155 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 MAPK6Q16659 721 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC9B1Q4ZJI4 515 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 FAM69AQ5T7M9 428 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 KRT79Q5XKE5 535 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 TYW3Q6IPR3 259 aaKnown RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 KIAA1161Q6NSJ0 714 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC27A1Q6PCB7 646 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 C1orf186Q6ZWK4 172 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 FJX1Q86VR8 437 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZBTB8OSQ8IWT0 167 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCDC105Q8IYK2 499 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 HACE1Q8IYU2 909 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 PARP16Q8N5Y8 322 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 AADATQ8N5Z0 425 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 SYT2Q8N9I0 419 aaPredicted RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 VN1R2Q8NFZ6 395 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 ARRDC2Q8TBH0 407 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 URGCPQ8TCY9 931 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 FAM216AQ8WUB2 273 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 NUDCD2Q8WVJ2 157 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 CASP10Q92851 521 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 MED30Q96HR3 178 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 AK8Q96MA6 479 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCDC43Q96MW1 224 aaKnown RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 MMTAG2Q9BU76 263 aaKnown RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 NUF2Q9BZD4 464 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 NT5C3AQ9H0P0 336 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 POLR3FQ9H1D9 316 aaPredicted RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 S1PR5Q9H228 398 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 TLE6Q9H808 572 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 SMYD2Q9NRG4 433 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 CYSLTR2Q9NS75 346 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 DDX19AQ9NUU7 478 aaKnown RBP3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 OR6C3Q9NZP0 311 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 SELENONQ9NZV5 590 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 KCND2Q9NZV8 630 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 MPP6Q9NZW5 540 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 DNAJB4Q9UDY4 337 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 ARHGAP26Q9UNA1 814 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 SMC3Q9UQE7 1217 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 NFE2L3Q9Y4A8 694 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 A3GALT2U3KPV4 340 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 CACNA1HO95180 2353 aa3.65□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZNF638Q14966 1978 aaKnown RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 DYTNA2CJ06 578 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ARL5CA6NH57 179 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 LRRIQ4A6NIV6 560 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 HIDE1A8MVS5 230 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 H3BQV1 296 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 TMEM189-UBE2V1I3L0A0 370 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 K7ERI5 159 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 GTPBP1O00178 669 aaKnown RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 TIMM23O14925 209 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 B4GALT5O43286 388 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 KCNJ13O60928 360 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 SERPINI2O75830 405 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 MTA2O94776 668 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 CXCL14O95715 111 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 F9P00740 461 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZNF12P17014 697 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ITGAXP20702 1163 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ABCD3P28288 659 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 C21orf33P30042 268 aaPredicted RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ABCD1P33897 745 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 LONP1P36776 959 aaKnown RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 RPL3P39023 403 aaKnown RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 PBX3P40426 434 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC11A1P49279 550 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 CLCN4P51793 760 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 BNC1Q01954 994 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 PTP4A2Q12974 167 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 GRIK3Q13003 919 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ITGADQ13349 1161 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 PRPF4BQ13523 1007 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms