RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MN1Q10571 1320 aaPredicted RBP18.92■□□□□ 0.62
DDX55-207ENST00000540763 ZFHX4Q86UP3 3567 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 FRYQ5TBA9 3013 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 PRAMEF33A0A0G2JMD5 474 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 FAM95CA0A1B0GW59 222 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 JUPP14923 745 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 CAPZBP47756 277 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 PDX1P52945 283 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 LIMK2P53671 638 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 TIAL1Q01085 375 aaKnown RBP eCLIP18.91■□□□□ 0.62
DDX55-207ENST00000540763 ISXQ2M1V0 245 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 GRTP1Q5TC63 336 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 UNQ6494/PRO21346Q6UXR6 183 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 CTAGE3PQ8IX95 158 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 OR5AR1Q8NGP9 310 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 GPR22Q99680 433 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 SLC30A3Q99726 388 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 TXLNGYQ9BZA5 131 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 POPDC3Q9HBV1 291 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 OGFRQ9NZT2 677 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 PDP2Q9P2J9 529 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 EPHA6Q9UF33 1036 aa18.91■□□□□ 0.62
DDX55-207ENST00000540763 C1QTNF9BB2RNN3 333 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 MATN2O00339 956 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 ACSL3O95573 720 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 C1QTNF9P0C862 333 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 AMD1P17707 334 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 MCM3P25205 808 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 CSF2RBP32927 897 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 SPRP35270 261 aaPredicted RBP18.9■□□□□ 0.62
DDX55-207ENST00000540763 CCNFP41002 786 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 ABCG1P45844 678 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 RGS4P49798 205 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 CDKN2DP55273 166 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 POU4F1Q01851 419 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 ZFP36L1Q07352 338 aaKnown RBP18.9■□□□□ 0.62
DDX55-207ENST00000540763 TRA2AQ13595 282 aaKnown RBP eCLIP18.9■□□□□ 0.62
DDX55-207ENST00000540763 KLHL38Q2WGJ6 581 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 AMZ1Q400G9 498 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 ACSBG2Q5FVE4 666 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 WDR93Q6P2C0 686 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 TMEM71Q6P5X7 295 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 PLXDC1Q8IUK5 500 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 SLITRK4Q8IW52 837 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 PPM1NQ8N819 430 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 MAGEC3Q8TD91 643 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 UBXN4Q92575 508 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 FAM136AQ96C01 138 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 ELMO2Q96JJ3 720 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 NUDT22Q9BRQ3 303 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 HGH1Q9BTY7 390 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 SCNM1Q9BWG6 230 aa18.9■□□□□ 0.62
DDX55-207ENST00000540763 ATXN7L1Q9ULK2 861 aaPredicted RBP18.9■□□□□ 0.62
DDX55-207ENST00000540763 CACNA1GO43497 2377 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 A0A087WUV0 522 aaPredicted RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 CSO75390 466 aaKnown RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 PSIP1O75475 530 aaKnown RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 C9P02748 559 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 SHMT2P34897 504 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 PMS2P54278 862 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 INHBCP55103 352 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 CFHR1Q03591 330 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 PDAP1Q13442 181 aaKnown RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 TTC23LQ6PF05 361 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 CCNI2Q6ZMN8 369 aaPredicted RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 OOSP2Q86WS3 158 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 RASGRP3Q8IV61 690 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 CPNE9Q8IYJ1 553 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 FBXO15Q8NCQ5 510 aaPredicted RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 PHC3Q8NDX5 983 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 OR52E1Q8NGJ3 308 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 SKA2Q8WVK7 121 aaPredicted RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 LCN9Q8WX39 176 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 LIN37Q96GY3 246 aaPredicted RBP18.89■□□□□ 0.61
DDX55-207ENST00000540763 RAB11FIP5Q9BXF6 653 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 RDH14Q9HBH5 336 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 MSRB2Q9Y3D2 182 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 ENTPD2Q9Y5L3 495 aa18.89■□□□□ 0.61
DDX55-207ENST00000540763 KNTC1P50748 2209 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 OR5K3A6NET4 321 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 CASC3O15234 703 aaKnown RBP18.88■□□□□ 0.61
DDX55-207ENST00000540763 TOX3O15405 576 aaPredicted RBP18.88■□□□□ 0.61
DDX55-207ENST00000540763 PIAS1O75925 651 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 C1orf105O95561 183 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 FAM153BP0C7A2 387 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 MYBL2P10244 700 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 THRAP10827 490 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 SPINK2P20155 84 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 ABRQ12979 859 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 TARDBPQ13148 414 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDX55-207ENST00000540763 EIF3IQ13347 325 aaKnown RBP18.88■□□□□ 0.61
DDX55-207ENST00000540763 FAM153CQ494X1 144 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 NKAIN2Q5VXU1 208 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 USP53Q70EK8 1073 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 TMPRSS9Q7Z410 1059 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 CNPY4Q8N129 248 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 CARFQ8N187 725 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 RSC1A1Q92681 617 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 RAD51AP1Q96B01 352 aa18.88■□□□□ 0.61
DDX55-207ENST00000540763 TSPAN17Q96FV3 270 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms