RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 C1orf228Q6PIY5 440 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 TSSK4Q6SA08 328 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 FRRS1Q6ZNA5 592 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 TPRG1Q6ZUI0 275 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 TOGARAM2Q6ZUX3 1019 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 BBS12Q6ZW61 710 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 BTN2A1Q7KYR7 527 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 CEP97Q8IW35 865 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 OR4N5Q8IXE1 308 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 MAML2Q8IZL2 1156 aaPredicted RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 CPSF7Q8N684 471 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 NFAM1Q8NET5 270 aaPredicted RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 GPRC5AQ8NFJ5 357 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 OR8K5Q8NH50 307 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 C11orf45Q8TAV5 145 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 GSDMBQ8TAX9 411 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 MRAPQ8TCY5 172 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 AGAP11Q8TF27 550 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 PSPC1Q8WXF1 523 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 KIF1BPQ96EK5 621 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ATXN7L3BQ96GX2 97 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ZNF597Q96LX8 424 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 C10orf90Q96M02 699 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 NECTIN4Q96NY8 510 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 LGMNQ99538 433 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 SEPT5Q99719 369 aaPredicted RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 ATF6BQ99941 703 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 UBAC1Q9BSL1 405 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 TMX4Q9H1E5 349 aaPredicted RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 WNT5BQ9H1J7 359 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 CPVLQ9H3G5 476 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 BRF2Q9HAW0 419 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ARNT2Q9HBZ2 717 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 EPB41L5Q9HCM4 733 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 A4GALTQ9NPC4 353 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 MTMR10Q9NXD2 777 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 TRMT1Q9NXH9 659 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 GTSE1Q9NYZ3 720 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 CWC15Q9P013 229 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 THAP10Q9P2Z0 257 aaPredicted RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 ABCD2Q9UBJ2 740 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 CNOT8Q9UFF9 292 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 DBNLQ9UJU6 430 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 FBXW11Q9UKB1 542 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 INTS6Q9UL03 887 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 NAALAD2Q9Y3Q0 740 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ABCA7Q8IZY2 2146 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 IGHV4-30-2A0A087WSY4 118 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 A0A1W2PQM1 296 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 A0A1W2PR80 420 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 WI2-2373I1.2A0A1W2PRP0 233 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 ANKRD61A6NGH8 418 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 AVILO75366 819 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 SH3BGRLO75368 114 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 DAB1O75553 588 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 SLC25A12O75746 678 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 SEC24AO95486 1093 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 HIST1H2ABP04908 130 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 IFIT1P09914 478 aaKnown RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 ALOX5P09917 674 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 SLC2A2P11168 524 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 HIST1H2ADP20671 130 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 PDHA2P29803 388 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 RIPK4P57078 832 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 B3GALT5-AS1P59052 145 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 CSNK2BP67870 215 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 IGLV3-21P80748 117 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 NEXNQ0ZGT2 675 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 OS9Q13438 667 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 RUNX3Q13761 415 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 TRIM14Q14142 442 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 NAB2Q15742 525 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 MS4A18Q3C1V0 323 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 TTC31Q49AM3 519 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 PDLIM3Q53GG5 364 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 LCN1P1Q5VSP4 162 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 WSCD1Q658N2 575 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 ADALQ6DHV7 355 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 CCDC174Q6PII3 467 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 REG3GQ6UW15 175 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 LCLAT1Q6UWP7 414 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 LINGO4Q6UY18 593 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 GLDNQ6ZMI3 551 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 HIST3H2AQ7L7L0 130 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 VASH2Q86V25 355 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 IQCHQ86VS3 1027 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 RTL3Q8N8U3 475 aaKnown RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 PPFIBP2Q8ND30 876 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 EXD1Q8NHP7 514 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 SSC4DQ8WTU2 575 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 POF1BQ8WVV4 589 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 SAAL1Q96ER3 474 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 APOPT1Q96IL0 206 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 CCDC136Q96JN2 1154 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 EGLN2Q96KS0 407 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 FNBP1Q96RU3 617 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 NKX3-1Q99801 234 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 CTRCQ99895 268 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 EBF4Q9BQW3 602 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 PYM1Q9BRP8 204 aaKnown RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms