RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 HGH1Q9BTY7 390 aa17.43■□□□□ 0.38
CHCHD3-203ENST00000448878 PITPNM3Q9BZ71 974 aa17.43■□□□□ 0.38
CHCHD3-203ENST00000448878 FAM96AQ9H5X1 160 aa17.43■□□□□ 0.38
CHCHD3-203ENST00000448878 RSPH14Q9UHP6 348 aa17.43■□□□□ 0.38
CHCHD3-203ENST00000448878 CSAG2Q9Y5P2 127 aa17.43■□□□□ 0.38
CHCHD3-203ENST00000448878 AP1M2Q9Y6Q5 423 aa17.43■□□□□ 0.38
CHCHD3-203ENST00000448878 CFAP99D6REC4 459 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 PRSS44E7EML9 344 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 AGTP01019 485 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 PRF1P14222 555 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 NR2C2P49116 596 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 TPM4P67936 248 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 FANCCQ00597 558 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 CDC16Q13042 620 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 MPP3Q13368 585 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 IRAK1BP1Q5VVH5 260 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 MFSD7Q6UXD7 560 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 TRIM73Q86UV7 250 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 ZNF567Q8N184 647 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 ZNF655Q8N720 491 aaPredicted RBP17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 C19orf47Q8N9M1 422 aaKnown RBP17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 OR2Y1Q8NGV0 311 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 WDR77Q9BQA1 342 aaPredicted RBP17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 FICDQ9BVA6 458 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 AP1M1Q9BXS5 423 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 UNKQ9C0B0 810 aaKnown RBP17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 TFB2MQ9H5Q4 396 aaKnown RBP17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 FAM60AQ9NP50 221 aa17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 TEP1Q99973 2627 aaKnown RBP17.42■□□□□ 0.38
CHCHD3-203ENST00000448878 CST8O60676 142 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 ZG16O60844 167 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 ALOX12BO75342 701 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 MBD3O95983 291 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 ATP1B2P14415 290 aaPredicted RBP17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 PECAM1P16284 738 aaPredicted RBP17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 ALAS2P22557 587 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 AIMP2Q13155 320 aaKnown RBP17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 TFDP2Q14188 446 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 ZRSR2Q15696 482 aaKnown RBP17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 RHBDD2Q6NTF9 364 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 SPESP1Q6UW49 350 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 ADGRF3Q8IZF5 1079 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 GRHL3Q8TE85 626 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 P3H4Q92791 437 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■■■■ 44.9
CHCHD3-203ENST00000448878 HAUS1Q96CS2 278 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 COPS8Q99627 209 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 RUBCNLQ9H714 662 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 MVB12BQ9H7P6 319 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 COG4Q9H9E3 785 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 DDX56Q9NY93 547 aaKnown RBP17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 NOVA2Q9UNW9 492 aaKnown RBP17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 ENTPD4Q9Y227 616 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 HYOU1Q9Y4L1 999 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 CROCCQ5TZA2 2017 aa17.41■□□□□ 0.38
CHCHD3-203ENST00000448878 DOPEY1Q5JWR5 2465 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 AGPSO00116 658 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 SGTAO43765 313 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 TMEM253P0C7T8 217 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 PDHA2P29803 388 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 PRLHRP49683 370 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 TAF1AQ15573 450 aaPredicted RBP17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 SLC18A3Q16572 532 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 NKAIN1Q4KMZ8 207 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 PPP1R32Q7Z5V6 425 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 FJX1Q86VR8 437 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 PROKR1Q8TCW9 393 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 TFGQ92734 400 aaPredicted RBP17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 ULK4Q96C45 1275 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 BARD1Q99728 777 aaKnown RBP17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 APOL2Q9BQE5 337 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 NDC1Q9BTX1 674 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 CCDC88CQ9P219 2028 aa17.4■□□□□ 0.38
CHCHD3-203ENST00000448878 C17orf113A0A1B0GUU1 675 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 ZSCAN9O15535 394 aaPredicted RBP17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 HCRTR1O43613 425 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 AKR1B10O60218 316 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 ARHGAP25P42331 645 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 GEMP55040 296 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 AGAP7PQ5VUJ5 663 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 TMEM151BQ8IW70 566 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 MCEMP1Q8IX19 187 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 PARP9Q8IXQ6 854 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 OR13C4Q8NGS5 318 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 IQCDQ96DY2 449 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 AGAP4Q96P64 663 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 VAT1Q99536 393 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 OR52A5Q9H2C5 316 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 VPS37BQ9H9H4 285 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 CDC23Q9UJX2 597 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 FBXL4Q9UKA2 621 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 NENFQ9UMX5 172 aa17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 TDRKHQ9Y2W6 561 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-203ENST00000448878 C5orf60A6NFR6 353 aa17.38■□□□□ 0.37
CHCHD3-203ENST00000448878 SPOPO43791 374 aa17.38■□□□□ 0.37
CHCHD3-203ENST00000448878 CNOT3O75175 753 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-203ENST00000448878 GYPCP04921 128 aa17.38■□□□□ 0.37
CHCHD3-203ENST00000448878 CTSBP07858 339 aa17.38■□□□□ 0.37
CHCHD3-203ENST00000448878 UMODP07911 640 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms