RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 KRT4P19013 534 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 KELP23276 732 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 YWHAQP27348 245 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ECHS1P30084 290 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 GDI1P31150 447 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SERPINB6P35237 376 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 AVPR1AP37288 418 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 HSPA9P38646 679 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 NPY4RP50391 375 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 LUMP51884 338 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 THOP1P52888 689 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 PER3P56645 1201 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 PCBP3P57721 371 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 RPL26P61254 145 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 NCALDP61601 193 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 GPC5P78333 572 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZXDAP98168 799 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZXDBP98169 803 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 RELAQ04206 551 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CKAP4Q07065 602 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SCN1BQ07699 218 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TNK2Q07912 1038 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ADIGQ0VDE8 80 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 BST2Q10589 180 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 AIMP2Q13155 320 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 BMPR2Q13873 1038 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CYLC2Q14093 348 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 WASHC2DQ5SRD0 308 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 AGBL2Q5U5Z8 902 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 GKAP1Q5VSY0 366 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 PMF1Q6P1K2 205 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 NCEH1Q6PIU2 408 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 DHRS4L2Q6PKH6 230 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ISLR2Q6UXK2 745 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 MTSS1LQ765P7 747 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CHST9Q7L1S5 443 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ADCK1Q86TW2 530 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SLC51BQ86UW2 128 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SLC47A2Q86VL8 602 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CMTM8Q8IZV2 173 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SLC44A3Q8N4M1 653 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 DCLK2Q8N568 766 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TC2NQ8N9U0 490 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZCCHC10Q8TBK6 192 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SLC20A1Q8WUM9 679 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 WBP2Q969T9 261 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TP53INP1Q96A56 240 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 HAUS1Q96CS2 278 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TMA16Q96EY4 203 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 GIMAP5Q96F15 307 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 MAP6Q96JE9 813 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 COX4I2Q96KJ9 171 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 HIST1H2AHQ96KK5 128 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ATP6V1G3Q96LB4 118 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 MYRFLQ96LU7 910 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 NSMCE3Q96MG7 304 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SLITRK1Q96PX8 696 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TXN2Q99757 166 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 HIST1H2AJQ99878 128 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 RHOXF2Q9BQY4 288 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SIKE1Q9BRV8 207 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 NAA11Q9BSU3 229 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 DUSP16Q9BY84 665 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ULBP1Q9BZM6 244 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 FOXP3Q9BZS1 431 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 B3GNT4Q9C0J1 378 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 PITHD1Q9GZP4 211 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ABCG8Q9H221 673 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 NCOR1P1Q9H4R4 102 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZFP14Q9HCL3 533 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CSNK1G1Q9HCP0 422 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 FAM114A2Q9NRY5 505 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 UCKL1Q9NWZ5 548 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 OSER1Q9NX31 292 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 RHBDL2Q9NX52 303 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 EURLQ9NYK6 297 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TRPM5Q9NZQ8 1165 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 DLGAP2Q9P1A6 1054 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 UXTQ9UBK9 157 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 FTSJ1Q9UET6 329 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 IL19Q9UHD0 177 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CYTH4Q9UIA0 394 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TCFL5Q9UL49 500 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZDHHC8Q9ULC8 765 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 WASF3Q9UPY6 502 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 LIPT1Q9Y234 373 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CPQQ9Y646 472 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 OBSL1O75147 1896 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 MYO16Q9Y6X6 1858 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TECTAO75443 2155 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 GREB1Q4ZG55 1949 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 WDFY4Q6ZS81 3184 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 A0A087WWL8 130 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 A0A0A6YYJ9 748 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 IQANK1A0A1B0GTG1 560 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SH3PXD2BA1X283 911 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 FAM92AA1XBS5 289 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms