RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 EIF4E1BA6NMX2 242 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 TBX10O75333 385 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 RSL1D1O76021 490 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 BAG3O95817 575 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 CH25HO95992 272 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 UQCRFS1P1P0C7P4 283 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 PRLRP16471 622 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 BDKRB2P30411 391 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 ROR2Q01974 943 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 FOXM1Q08050 763 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 MAD2L1Q13257 205 aaPredicted RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 DCST1Q5T197 706 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 FRG2Q64ET8 278 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 GUF1Q8N442 669 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 TDRD5Q8NAT2 981 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 CDRT15Q96T59 188 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 RIOK1Q9BRS2 568 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 CCDC106Q9BWC9 280 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 RTN4RQ9BZR6 473 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 API5Q9BZZ5 524 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 RBM38Q9H0Z9 239 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 EBF3Q9H4W6 596 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 RPAP3Q9H6T3 665 aaPredicted RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 BCCIPQ9P287 314 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 C5AR2Q9P296 337 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 DBNLQ9UJU6 430 aaKnown RBP5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 ANAPC2Q9UJX6 822 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 PHIPQ8WWQ0 1821 aa5.52□□□□□ -1.53
RNU4-39P-201ENST00000362455 DDX60LQ5H9U9 1706 aaKnown RBP5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 DNAJC9-AS1A6NH13 148 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 OR6C75A6NL08 312 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 SOCS6O14544 535 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 SPINT2O43291 252 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 PLPP2O43688 288 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 MOSPD3O75425 235 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 BCL10O95999 233 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 PGK1P00558 417 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 AFPP02771 609 aaKnown RBP5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 FOSL2P15408 326 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 FBLP22087 321 aaKnown RBP5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 AMTP48728 403 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 HNRNPH2P55795 449 aaKnown RBP5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 CCNA1P78396 465 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 ABATP80404 500 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 PPP2R2BQ00005 443 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 SNTB1Q13884 538 aaKnown RBP5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 CTF1Q16619 201 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 AMZ1Q400G9 498 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 COLEC12Q5KU26 742 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 PAPPA-AS1Q5QFB9 102 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 NRROSQ86YC3 692 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 RASGEF1CQ8N431 466 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 PCDH20Q8N6Y1 951 aaKnown RBP5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 OR2AK2Q8NG84 335 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 GSDMBQ8TAX9 411 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 ARHGAP45Q92619 1136 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 PTERQ96BW5 349 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 DDOQ99489 341 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 SPATC1LQ9H0A9 340 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 DENND2DQ9H6A0 471 aaPredicted RBP5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 WDR35Q9P2L0 1181 aa5.51□□□□□ -1.53
RNU4-39P-201ENST00000362455 ATXN2Q99700 1313 aaKnown RBP5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 CHD7Q9P2D1 2997 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 LOC285556D6RIA3 1793 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 hDV102S1A0JD36 115 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 TMEM8BA6NDV4 472 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 A8MXE2 369 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 IDH1O75874 414 aaKnown RBP5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 GGPS1O95749 300 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 PGK2P07205 417 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 MYBL1P10243 752 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 LMO1P25800 156 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 EEF1DP29692 281 aaKnown RBP5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 C21orf33P30042 268 aaPredicted RBP5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 APOBEC1P41238 236 aaKnown RBP5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 ARSEP51690 589 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 RAD23AP54725 363 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 IL11RAQ14626 422 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 COG2Q14746 738 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 DECR1Q16698 335 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 MYLK3Q32MK0 819 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 TCP11X2Q5H9J9 407 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 DAB2IPQ5VWQ8 1189 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 LCN10Q6JVE6 187 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 C11orf87Q6NUJ2 197 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 HMGCLL1Q8TB92 370 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 LPGAT1Q92604 370 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 DYNLL2Q96FJ2 89 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 DACH2Q96NX9 599 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 DCLK3Q9C098 648 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 SLCO5A1Q9H2Y9 848 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 MMP27Q9H306 513 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 NOX4Q9NPH5 578 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 SH3GLB2Q9NR46 395 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 HOXC10Q9NYD6 342 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 TAS2R14Q9NYV8 317 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 GDE1Q9NZC3 331 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 CRNNQ9UBG3 495 aaPredicted RBP5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 TBX21Q9UL17 535 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 AGO1Q9UL18 857 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms