RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GTF2H2Q13888 395 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 GTF2H2CQ6P1K8 395 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 PQLC1Q8N2U9 271 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 FAM13CQ8NE31 585 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 LCN9Q8WX39 176 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 NODALQ96S42 347 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 TBL1XR1Q9BZK7 514 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 ADH1AP07327 375 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 GJD3Q8N144 294 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 MKL1Q969V6 931 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 NELFAQ9H3P2 528 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 GLYATL1P3A0A0U1RQE8 302 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 SLC31A1O15431 190 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 FAM92BQ6ZTR7 304 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 TRMT10AQ8TBZ6 339 aaKnown RBP16.16■□□□□ 0.18
PTCH1-201ENST00000331920 SNRNP25Q9BV90 132 aaKnown RBP16.16■□□□□ 0.18
PTCH1-201ENST00000331920 PCDH18Q9HCL0 1135 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 SORCS3Q9UPU3 1222 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 LATS1O95835 1130 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 PAEPP09466 180 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 AKR1A1P14550 325 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 HSPA7P48741 367 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 GPR68Q15743 365 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 SSX2Q16385 188 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 UGT8Q16880 541 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 NKAPLQ5M9Q1 402 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 WDR55Q9H6Y2 383 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 GNG8Q9UK08 70 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 SMIM30A4D0T7 59 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 RPS12P25398 132 aaKnown RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 SMAD3P84022 425 aaKnown RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 SEMA3AQ14563 771 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 TSEN2Q8NCE0 465 aaKnown RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 C17orf50Q8WW18 174 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 SAT2Q96F10 170 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 NANSQ9NR45 359 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 ARHGEF4Q9NR80 690 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 TACSTD2P09758 323 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 CBLP22681 906 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 CREMQ03060 361 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 ZNF267Q14586 743 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 GPR158Q5T848 1215 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 TUBA3EQ6PEY2 450 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 C7orf61Q8IZ16 206 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 ZBTB2Q8N680 514 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 OR10A6Q8NH74 314 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 KIAA1522Q9P206 1035 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 RAB26Q9ULW5 256 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 FZD1Q9UP38 647 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 CLCA3PQ9Y6N3 262 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 H3BUI4 141 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 EML1O00423 815 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 PTNP21246 168 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 GNPDA1P46926 289 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 MED27Q6P2C8 311 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 MIPEPQ99797 713 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 ANKRA2Q9H9E1 313 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 SLCO1B3Q9NPD5 702 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 NCBP2P52298 156 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 CXCL17Q6UXB2 119 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 TTTY10Q9BZA0 68 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 CFIP05156 583 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 CBLBQ13191 982 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 TEAD4Q15561 434 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 LRRC73Q5JTD7 316 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 NBPF12Q5TAG4 269 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 UBE2UQ5VVX9 321 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 PRMT6Q96LA8 375 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-201ENST00000331920 FN3KQ9H479 309 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 POU2F3Q9UKI9 436 aa16.15■□□□□ 0.18
PTCH1-201ENST00000331920 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.18
PTCH1-201ENST00000331920 H0YGN5 161 aa16.14■□□□□ 0.18
PTCH1-201ENST00000331920 SPARCP09486 303 aa16.14■□□□□ 0.18
PTCH1-201ENST00000331920 MAMLD1Q13495 774 aa16.14■□□□□ 0.18
PTCH1-201ENST00000331920 EIF5AL1Q6IS14 154 aaKnown RBP16.14■□□□□ 0.18
PTCH1-201ENST00000331920 PIWIL4Q7Z3Z4 852 aaKnown RBP16.14■□□□□ 0.18
PTCH1-201ENST00000331920 C4orf19Q8IY42 314 aa16.14■□□□□ 0.18
PTCH1-201ENST00000331920 DNERQ8NFT8 737 aa16.14■□□□□ 0.18
PTCH1-201ENST00000331920 HSPA12BQ96MM6 686 aa16.14■□□□□ 0.18
PTCH1-201ENST00000331920 PWWP2AQ96N64 755 aa16.14■□□□□ 0.18
PTCH1-201ENST00000331920 DDX4Q9NQI0 724 aaKnown RBP16.14■□□□□ 0.18
PTCH1-201ENST00000331920 SIGLEC16A6NMB1 481 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 GRM6O15303 877 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 ZNF410Q86VK4 478 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 VCPIP1Q96JH7 1222 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 SRMSQ9H3Y6 488 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 HSBP1L1C9JCN9 74 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 TRAFD1O14545 582 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-201ENST00000331920 ITGA10O75578 1167 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 UGT2B4P06133 528 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 MLLT3P42568 568 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-201ENST00000331920 NRLP54845 237 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 E2F1Q01094 437 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 GPR153Q6NV75 609 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 TNFAIP8L2Q6P589 184 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-201ENST00000331920 LINGO4Q6UY18 593 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 ZNF527Q8NB42 609 aa16.14■□□□□ 0.17
PTCH1-201ENST00000331920 FARSBQ9NSD9 589 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms