RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ATP5C1P36542 298 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 ALDH9A1P49189 494 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 CASP9P55211 416 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 STARD3Q14849 445 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 GPR162Q16538 588 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 TIGD6Q17RP2 521 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 HMBOX1Q6NT76 420 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 MSANTD2Q6P1R3 559 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 SYVN1Q86TM6 617 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 WDR36Q8NI36 951 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 EHD1Q9H4M9 534 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 MIEF1Q9NQG6 463 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 FAM118AQ9NWS6 357 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 USP22Q9UPT9 525 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 TMED5Q9Y3A6 229 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 A0A1W2PQ67 120 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 KRT87PA6NCN2 255 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 FAM25AB3EWG3 89 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 FAM25CB3EWG5 89 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 FAM25GB3EWG6 89 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 TMX2-CTNND1H3BSU7 103 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 GSRP00390 522 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 PRSS56P0CW18 603 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 C7P10643 843 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 HAPLN1P10915 354 aaPredicted RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 AGXTP21549 392 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 EDNRBP24530 442 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 RPS14P62263 151 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 PARP15Q460N3 678 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 CEP78Q5JTW2 689 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 MFSD14CQ5VZR4 134 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 PDE12Q6L8Q7 609 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 EIF3MQ7L2H7 374 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 LYSMD3Q7Z3D4 306 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 GPR142Q7Z601 462 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 ACDQ96AP0 544 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 HDHD2Q9H0R4 259 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 AIG1Q9NVV5 245 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 NUDT4Q9NZJ9 180 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 SLAMF8Q9P0V8 285 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 LSM7Q9UK45 103 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 ZNF701M0R085 212 aaPredicted RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 FPGTO14772 594 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 CREG1O75629 220 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 PGRP06401 933 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 GSTT2P0CG29 244 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 GSTT2BP0CG30 244 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 CYP2A7P20853 494 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 GTF2E2P29084 291 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 STC1P52823 247 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 SLC16A1P53985 500 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 YBEYP58557 167 aaPredicted RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 IL10RBQ08334 325 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 ZNF404Q494X3 552 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 PKDCCQ504Y2 493 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 TPRG1LQ5T0D9 272 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 RETSATQ6NUM9 610 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 FBXL22Q6P050 247 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 ENPP6Q6UWR7 440 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 OR52B6Q8NGF0 335 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 TMEM125Q96AQ2 219 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 TSGA13Q96PP4 275 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 WDR6Q9NNW5 1121 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 ABCB9Q9NP78 766 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 SDR39U1Q9NRG7 319 aaPredicted RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 CLN6Q9NWW5 311 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 H2AFY2Q9P0M6 372 aaPredicted RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 ZNF510Q9Y2H8 683 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 FFAR2O15552 330 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 IL6P05231 212 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 TSPAN19P0C672 248 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 HTR1EP28566 365 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 HOXA11P31270 313 aaPredicted RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 HPCAL1P37235 193 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 TUSC3Q13454 348 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 CES5AQ6NT32 575 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 DUS1LQ6P1R4 473 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 RANBP10Q6VN20 620 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 PTCHD4Q6ZW05 846 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 GPC2Q8N158 579 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 MINDY2Q8NBR6 621 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 ATG10Q9H0Y0 220 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 NSUN3Q9H649 340 aaKnown RBP10.35□□□□□ -0.75
USB1-212ENST00000566082 AASSQ9UDR5 926 aa10.35□□□□□ -0.75
USB1-212ENST00000566082 LCHNA4D1U4 455 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 A8MV72 311 aaPredicted RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 ZBTB42B2RXF5 422 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 TNFRSF11BO00300 401 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 SLC1A7O00341 560 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PER2O15055 1255 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 CKMP06732 381 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 HTR7P34969 479 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 NNMTP40261 264 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PLEKHG6Q3KR16 790 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 ALFQ53S48 1182 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PYDC2Q56P42 97 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 ITIH5Q86UX2 942 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 RAB43Q86YS6 212 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms