RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 ZSCAN16Q9H4T2 348 aaPredicted RBP3.89□□□□□ -1.79
CTHRC1-204ENST00000520880 MAP3K20Q9NYL2 800 aaKnown RBP3.89□□□□□ -1.79
CTHRC1-204ENST00000520880 ACSL5Q9ULC5 683 aa3.89□□□□□ -1.79
CTHRC1-204ENST00000520880 GPR52Q9Y2T5 361 aa3.89□□□□□ -1.79
CTHRC1-204ENST00000520880 KIF3AQ9Y496 699 aa3.89□□□□□ -1.79
CTHRC1-204ENST00000520880 MYH4Q9Y623 1939 aa3.89□□□□□ -1.79
CTHRC1-204ENST00000520880 ROBO3Q96MS0 1386 aa3.89□□□□□ -1.79
CTHRC1-204ENST00000520880 BRCA1P38398 1863 aaKnown RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 H3BQV1 296 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 VCYO14598 125 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 IFIT3O14879 490 aaKnown RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 SPINT2O43291 252 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 ZBTB43O43298 467 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 RANBP6O60518 1105 aaKnown RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 UFL1O94874 794 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 COX7A2P14406 83 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 HMGB2P26583 209 aaKnown RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 CHRNB4P30926 498 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 GGT5P36269 586 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 GABRB2P47870 512 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 FASLGP48023 281 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 GNAQP50148 359 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 COL28A1Q2UY09 1125 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 CTR9Q6PD62 1173 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 TMED8Q6PL24 325 aaPredicted RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 MFSD6Q6ZSS7 791 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 DZIP1Q86YF9 867 aaKnown RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 APLFQ8IW19 511 aaPredicted RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 FCAMRQ8WWV6 532 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 C8orf76Q96K31 380 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 LRR1Q96L50 414 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 RPS6KC1Q96S38 1066 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 FUZQ9BT04 418 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 FUCA2Q9BTY2 467 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 FTOQ9C0B1 505 aaKnown RBP eCLIP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 RNF41Q9H4P4 317 aaPredicted RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 SLC52A3Q9NQ40 469 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 AATFQ9NY61 560 aaKnown RBP eCLIP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 ORC3Q9UBD5 711 aaPredicted RBP3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 POLG2Q9UHN1 485 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 KLHL20Q9Y2M5 609 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 COMMD10Q9Y6G5 202 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 MROH7-TTC4A0A0A0MT08 1334 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 STK36Q9NRP7 1315 aa3.88□□□□□ -1.79
CTHRC1-204ENST00000520880 CCDC69A6NI79 296 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 TNPO2O14787 897 aaKnown RBP3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 CPLX1O14810 134 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 CTSVO60911 334 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 PEX14O75381 377 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 BBOX1O75936 387 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 LDHAP00338 332 aaKnown RBP3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ERVK-10P10266 1014 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 PCP11498 1178 aaKnown RBP3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 IFNAR1P17181 557 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 BIRC2Q13490 618 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 WTAPQ15007 396 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 DECR1Q16698 335 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ALG11Q2TAA5 492 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 SBK1Q52WX2 424 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ATL3Q6DD88 541 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ZCCHC10Q8TBK6 192 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 TBC1D16Q8TBP0 767 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ESR2Q92731 530 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 USP28Q96RU2 1077 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ARPC5LQ9BPX5 153 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 CRNKL1Q9BZJ0 848 aaKnown RBP3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 GPR63Q9BZJ6 419 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 TSPY26PQ9H489 355 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 CD209Q9NNX6 404 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ACSS1Q9NUB1 689 aaPredicted RBP3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 POLLQ9UGP5 575 aa3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 BAZ2BQ9UIF8 2168 aaKnown RBP3.87□□□□□ -1.79
CTHRC1-204ENST00000520880 ERICH2A1L162 156 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 HHLA1C9JL84 531 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 EIF3DO15371 548 aaKnown RBP eCLIP3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 PIP5K1CO60331 668 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 CIDEAO60543 219 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 CRLF1O75462 422 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 PRDM1O75626 825 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 SEC31AO94979 1220 aaKnown RBP3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 LETM1O95202 739 aaPredicted RBP3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 YEATS4O95619 227 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 HOXB5P09067 269 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 MMP10P09238 476 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 PRSS56P0CW18 603 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 ARCN1P48444 511 aaKnown RBP3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 CLDN20P56880 219 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 GSTO1P78417 241 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 CEBPZQ03701 1054 aaKnown RBP3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 CCDC173Q0VFZ6 552 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 PPFIA1Q13136 1202 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 CAMK1Q14012 370 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 FGFBP1Q14512 234 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 LPAL2Q16609 132 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 C18orf63Q68DL7 685 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 SIGIRRQ6IA17 410 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 FAM53AQ6NSI3 398 aaPredicted RBP3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 OLFM4Q6UX06 510 aa3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 ZNF704Q6ZNC4 412 aaPredicted RBP3.86□□□□□ -1.79
CTHRC1-204ENST00000520880 RBM43Q6ZSC3 357 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms