RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 FRG1Q14331 258 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TWIST1Q15672 202 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 NPTX1Q15818 432 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 GPR162Q16538 588 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ANXA2RQ3ZCQ2 193 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TTMPQ5BVD1 217 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 KRBOX4Q5JUW0 171 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 C6orf163Q5TEZ5 329 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 AGBL2Q5U5Z8 902 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 MZT2BQ6NZ67 158 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 MSANTD2Q6P1R3 559 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 C11orf88Q6PI97 169 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 KLHL17Q6TDP4 642 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCNI2Q6ZMN8 369 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 RBM44Q6ZP01 1051 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 C15orf52Q6ZUT6 534 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 PLEKHM3Q6ZWE6 761 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM57BQ71RH2 274 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 G2E3Q7L622 706 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 RAB11FIP2Q7L804 512 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 PEX26Q7Z412 305 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZER1Q7Z7L7 766 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 DNAAF5Q86Y56 855 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC38A6Q8IZM9 456 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TCAIMQ8N3R3 496 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CPSF7Q8N684 471 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 MYCT1Q8N699 235 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 NANOGP1Q8N7R0 232 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 EIF1ADQ8N9N8 165 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 C16orf52Q8NHV5 167 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 LRRC8CQ8TDW0 803 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC22A17Q8WUG5 538 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SCFD1Q8WVM8 642 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CPT1BQ92523 772 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 INPP5DQ92835 1189 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CELF1Q92879 486 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 EID2BQ96D98 161 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 HDAC11Q96DB2 347 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CHMP6Q96FZ7 201 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 RMND5BQ96G75 393 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM237Q96Q45 408 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF184Q99676 751 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 HERPUD2Q9BSE4 406 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 MLPHQ9BV36 600 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 WNT5BQ9H1J7 359 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM245Q9H330 911 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 DPEP3Q9H4B8 488 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCDC134Q9H6E4 229 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 AZI2Q9H6S1 392 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 EPS8L2Q9H6S3 715 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SYTL2Q9HCH5 934 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMLHEQ9NVH6 421 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 DDX43Q9NXZ2 648 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 LNPEPQ9UIQ6 1025 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SH3BGRL2Q9UJC5 107 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 GNPTGQ9UJJ9 305 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ANGPTL2Q9UKU9 493 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 B3GNT3Q9Y2A9 372 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF175Q9Y473 711 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 MTF2Q9Y483 593 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 RGPD1P0DJD0 1748 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 PEAK1Q9H792 1746 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 MROH5Q6ZUA9 1318 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 A0A087WV62 115 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3DA0A087WVF3 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3IA0A087WXS9 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3EA0A087X179 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3KA0A087X1G2 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 hCG_1642624A0A1W2PR95 340 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ARHGEF37A1IGU5 675 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ILVBLA1L0T0 632 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TYW5A2RUC4 315 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3BA6NDS4 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3FA6NER0 549 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3LB9A6J9 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRSS44E7EML9 344 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 H7C0C1 242 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 UBXN8O00124 270 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CACNB4O00305 520 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SYT5O00445 386 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 KPNA4O00629 521 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SOCS2O14508 198 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PPEF2O14830 753 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 IKBKBO14920 756 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SCO2O43819 266 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 DKC1O60832 514 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 MOSPD3O75425 235 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TAF5LO75529 589 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SNAPINO95295 136 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TGDSO95455 350 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 BMP15O95972 392 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 AGR2O95994 175 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 MBPP02686 304 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 IFNA16P05015 189 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 APOA4P06727 396 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3HP0C7X1 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CTSAP10619 480 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 MYL6BP14649 208 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATP6V1B1P15313 513 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ITGB6P18564 788 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms