RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MAP3K13O43283 966 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 FAM107AO95990 144 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 HIST1H2AGP0C0S8 130 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-208ENST00000469529 SP9P0CG40 484 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 HIST1H2ADP20671 130 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 CYP2A7P20853 494 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 DRD4P21917 467 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 CD38P28907 300 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 PDHA2P29803 388 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 RPIAP49247 311 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 NAGLUP54802 743 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 SRP54P61011 504 aaKnown RBP12.46□□□□□ -0.41
TRAF4-208ENST00000469529 ABCE1P61221 599 aaKnown RBP12.46□□□□□ -0.41
TRAF4-208ENST00000469529 CTBSQ01459 385 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 RPL6Q02878 288 aaKnown RBP12.46□□□□□ -0.41
TRAF4-208ENST00000469529 ZNF678Q5SXM1 525 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 TPRG1LQ5T0D9 272 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 ENPP7Q6UWV6 458 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 ABRAXAS1Q6UWZ7 409 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 RAB44Q7Z6P3 723 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-208ENST00000469529 PIGWQ7Z7B1 504 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 KLHDC8AQ8IYD2 350 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 TCAIMQ8N3R3 496 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 FBXO39Q8N4B4 442 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 MAGEC3Q8TD91 643 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 UBTD2Q8WUN7 234 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 OR1E3Q8WZA6 343 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 SKA1Q96BD8 255 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 HIST1H2AHQ96KK5 128 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 CCDC138Q96M89 665 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 CCT8L2Q96SF2 557 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 HIST1H2AJQ99878 128 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 H2AFJQ9BTM1 129 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 MECRQ9BV79 373 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 PITPNM3Q9BZ71 974 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 ADAMTS6Q9UKP5 1117 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 PDE10AQ9Y233 779 aa12.46□□□□□ -0.41
TRAF4-208ENST00000469529 CACNA1IQ9P0X4 2223 aa12.46□□□□□ -0.42
TRAF4-208ENST00000469529 LRRK1Q38SD2 2015 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 NPEPPSL1A6NEC2 478 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 H0Y8X5 98 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 UBXN8O00124 270 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 C1orf105O95561 183 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 TNFP01375 233 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 CATP04040 527 aaKnown RBP12.45□□□□□ -0.42
TRAF4-208ENST00000469529 FGF4P08620 206 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 ANXA5P08758 320 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 THEGLP0DJG4 465 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 NEFHP12036 1026 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 IDSP22304 550 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 SLC1A6P48664 564 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 BLKP51451 505 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 SEC24CP53992 1094 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 PPARDQ03181 441 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 CSTF1Q05048 431 aaKnown RBP12.45□□□□□ -0.42
TRAF4-208ENST00000469529 PCDH1Q08174 1060 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 DMWDQ09019 674 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 FZD2Q14332 565 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 NFE2L1Q14494 772 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 SETDB1Q15047 1291 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 PHKG1Q16816 387 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 PFKFB4Q16877 469 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 SYTL3Q4VX76 610 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 CES4AQ5XG92 561 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 ANKS6Q68DC2 871 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 DOK6Q6PKX4 331 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 CRTC3Q6UUV7 619 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 FAM83HQ6ZRV2 1179 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-208ENST00000469529 UBE2R2Q712K3 238 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-208ENST00000469529 ASCL5Q7RTU5 278 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 PDZD3Q86UT5 571 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 LRRC34Q8IZ02 419 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 SLC22A18ASQ8N1D0 253 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 SDR16C5Q8N3Y7 309 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 CHCHD4Q8N4Q1 142 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 PHC3Q8NDX5 983 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 OR13H1Q8NG92 308 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 ATL1Q8WXF7 558 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 RHBDF1Q96CC6 855 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 FBXL8Q96CD0 374 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 ZC3H10Q96K80 434 aaKnown RBP12.45□□□□□ -0.42
TRAF4-208ENST00000469529 OR2M4Q96R27 311 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 UNKQ9C0B0 810 aaKnown RBP12.45□□□□□ -0.42
TRAF4-208ENST00000469529 ZDHHC5Q9C0B5 715 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 KLQ9UEF7 1012 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 EIF2B4Q9UI10 523 aaKnown RBP12.45□□□□□ -0.42
TRAF4-208ENST00000469529 CA5BQ9Y2D0 317 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 R4GN57 208 aa12.45□□□□□ -0.42
TRAF4-208ENST00000469529 NUMA1Q14980 2115 aa12.44□□□□□ -0.42
TRAF4-208ENST00000469529 NEMP2A6NFY4 417 aa12.44□□□□□ -0.42
TRAF4-208ENST00000469529 PRR5-ARHGAP8B1AHC4 643 aa12.44□□□□□ -0.42
TRAF4-208ENST00000469529 MYO1CO00159 1063 aa12.44□□□□□ -0.42
TRAF4-208ENST00000469529 TLR4O00206 839 aa12.44□□□□□ -0.42
TRAF4-208ENST00000469529 VILLO15195 856 aa12.44□□□□□ -0.42
TRAF4-208ENST00000469529 SNX2O60749 519 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms