RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 NENFQ9UMX5 172 aa0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 EXO1Q9UQ84 846 aaKnown RBP0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 MTMR6Q9Y217 621 aa0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 MRPS28Q9Y2Q9 187 aaKnown RBP0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 WBP11Q9Y2W2 641 aaKnown RBP0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 RABGAP1Q9Y3P9 1069 aa0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 RIPK3Q9Y572 518 aa0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 MMP24Q9Y5R2 645 aa0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 SPIN1Q9Y657 262 aaPredicted RBP0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 SESN1Q9Y6P5 492 aa0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 SEC23IPQ9Y6Y8 1000 aaKnown RBP0.43□□□□□ -2.34
SNORA40.8-201ENST00000411034 COL2A1P02458 1487 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ARID4BQ4LE39 1312 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ZNF541Q9H0D2 1346 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SMCHD1A6NHR9 2005 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 A0A087WW49 117 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 LOC102723996A0A087X1L8 192 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 GPR75-ASB3A0A0A6YYF3 556 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 IGKV3D-20A0A0C4DH25 116 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 A0A0J9YWU9 116 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 LOC101059948A0A1B0GTJ6 334 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 A0A1W2PN81 502 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 A0A1W2PQ09 198 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 A0A1W2PRB8 838 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 LNP1A1A4G5 178 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 MEX3AA1L020 520 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 NDUFAF8A1L188 74 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 FSD2A1L4K1 749 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 HYKKA2RU49 373 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 A6NCN8 305 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 TMEM221A6NGB7 291 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 MSGN1A6NI15 193 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 PTGES3LE9PB15 166 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SLCO1B7G3V0H7 640 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 H7C423 109 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SH2B2O14492 632 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 GAPDHSO14556 408 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 AP3D1O14617 1153 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 VILLO15195 856 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ADAMDEC1O15204 470 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CLIC2O15247 247 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ATP6V0E1O15342 81 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ARHGEF9O43307 516 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 XRCC3O43542 346 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 PI15O43692 258 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SSX4O60224 188 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ENTPD3O75355 529 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 MED24O75448 989 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CDC123O75794 336 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 BAIAP3O94812 1187 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 TOMM70O94826 608 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SORBS2O94875 1100 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ZWINTO95229 277 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 PGM3O95394 542 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 PIGNO95427 931 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 DUS4LO95620 317 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CAVIN2O95810 425 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CLDN1O95832 211 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 EML2O95834 649 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 WDPCPO95876 746 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 BCL10O95999 233 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 EDN1P05305 212 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 HMBSP08397 361 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 PLA2G4BP0C869 781 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 IGHV4-31P0DP07 118 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 HSPA8P11142 646 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 KRT5P13647 590 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 DPEP1P16444 411 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CEBPBP17676 345 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 TRIM21P19474 475 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 TYMPP19971 482 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 EFNA1P20827 205 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CA4P22748 312 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SP100P23497 879 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 GATA2P23769 480 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 PTPN3P26045 913 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 HOXC13P31276 330 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 GABRA5P31644 462 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 HOXD13P35453 343 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 KRT2P35908 639 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CHRNA7P36544 502 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 PSMB10P40306 273 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SLC15A1P46059 708 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SLC6A12P48065 614 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 BMXP51813 675 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 MFAP4P55083 255 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 TPD52P55327 224 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SNX16P57768 344 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 DSCR10P59022 87 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ARF3P61204 181 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 HNRNPKP61978 463 aaKnown RBP eCLIP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 RPS18P62269 152 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SNRPD1P62314 119 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 SIRPAP78324 504 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CX3CL1P78423 397 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 TMF1P82094 1093 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 ARF1P84077 181 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 MAT1AQ00266 395 aaKnown RBP0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CREB5Q02930 508 aa0.42□□□□□ -2.34
SNORA40.8-201ENST00000411034 CXCL9Q07325 125 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms