RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TEKQ02763 1124 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ZBTB17Q13105 803 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PTK6Q13882 451 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SLC29A2Q14542 456 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 DRAP1Q14919 205 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PPP1R7Q15435 360 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 GEN1Q17RS7 908 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PARP6Q2NL67 630 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 MYLK3Q32MK0 819 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 P3H1Q32P28 736 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 LIN52Q52LA3 116 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SGO2Q562F6 1265 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 NHSL2Q5HYW2 709 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 NKAPLQ5M9Q1 402 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ATXN7L2Q5T6C5 722 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 LIPMQ5VYY2 423 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PAPD7Q5XG87 772 aaKnown RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ARHGAP17Q68EM7 881 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SIGIRRQ6IA17 410 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 MRNIPQ6NTE8 343 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 DENND1BQ6P3S1 775 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 TTC23LQ6PF05 361 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 KLHL35Q6PF15 583 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 DRICH1Q6PGQ1 229 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 VITQ6UXI7 678 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 CYP2R1Q6VVX0 501 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF574Q6ZN55 896 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ASRGL1Q7L266 308 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PIGWQ7Z7B1 504 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PIGZQ86VD9 579 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ARID3BQ8IVW6 561 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ZBED8Q8IZ13 594 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 DTWD1Q8N5C7 304 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SLC15A4Q8N697 577 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ARL14EPQ8N8R7 260 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 POC5Q8NA72 575 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 LEMD2Q8NC56 503 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 UBA3Q8TBC4 463 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 FNDC8Q8TC99 324 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 CLEC4CQ8WTT0 213 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 FAM216AQ8WUB2 273 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 KCNE4Q8WWG9 221 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ATL1Q8WXF7 558 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 STARD8Q92502 1023 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 NDRG1Q92597 394 aaKnown RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 MRPS31Q92665 395 aaKnown RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SMARCD2Q92925 531 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ZFYVE19Q96K21 471 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 CMTM3Q96MX0 182 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 LRRC3BQ96PB8 259 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 CYP2S1Q96SQ9 504 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 AGAP2Q99490 1192 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 NAPGQ99747 312 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PIP5K1AQ99755 562 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SLC46A2Q9BY10 475 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 FAM129AQ9BZQ8 928 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 GPR88Q9GZN0 384 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 DRC3Q9H069 523 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 GANQ9H2C0 597 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 CCDC134Q9H6E4 229 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 TASP1Q9H6P5 420 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 RNPEPL1Q9HAU8 725 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 NMUR1Q9HB89 426 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SIRT3Q9NTG7 399 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 GIMAP4Q9NUV9 329 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 ZSCAN32Q9NX65 697 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SMPD4Q9NXE4 827 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 GDE1Q9NZC3 331 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 NINJ2Q9NZG7 142 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.52□□□□□ -1.69
SF3B1-202ENST00000409915 AIPL1Q9NZN9 384 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 IFNKQ9P0W0 207 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 FETUBQ9UGM5 382 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 NUDT5Q9UKK9 219 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 SORCS3Q9UPU3 1222 aa4.52□□□□□ -1.69
SF3B1-202ENST00000409915 PATJQ8NI35 1801 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TRAV19A0A0A6YYK7 116 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF840PA6NDX5 716 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SAC3D1A6NKF1 404 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 HEPACAM2A8MVW5 462 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ANHXE9PGG2 379 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 H0Y858 1186 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 SGK1O00141 431 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 COCHO43405 550 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 FOXD2O60548 495 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 HNRNPCL1O60812 293 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF254O75437 659 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 TJP3O95049 919 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 LCA5LO95447 670 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 FGF19O95750 216 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 LMNAP02545 664 aaKnown RBP4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CYP1A2P05177 515 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 CD1AP06126 327 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 INHBAP08476 426 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 RHOXF2BP0C7M4 288 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 IRF1P10914 325 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 UCHL3P15374 230 aa4.51□□□□□ -1.69
SF3B1-202ENST00000409915 NAGAP17050 411 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms