RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SPANXN4Q5MJ08 99 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 NOL9Q5SY16 702 aaKnown RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 C14orf80Q86SX3 495 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 NELL1Q92832 810 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 BTN2A3PQ96KV6 586 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CIPCQ9C0C6 399 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 ZIM2Q9NZV7 527 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 TESMINQ9Y4I5 508 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 KRBA1A5PL33 1030 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 TBKBP1A7MCY6 615 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 SUV39H1O43463 412 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CHRM5P08912 532 aaPredicted RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 RPL9P32969 192 aaKnown RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 GDF5P43026 501 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.37□□□□□ -0.75
USB1-212ENST00000566082 ELP6Q0PNE2 266 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 TAF10Q12962 218 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CASP12Q6UXS9 341 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 HACD2Q6Y1H2 254 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 ADCK2Q7Z695 626 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 C11orf96Q7Z7L8 435 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 SCML4Q8N228 414 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CAMKK1Q8N5S9 505 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 EEF1AKMT1Q8WVE0 214 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 HDAC2Q92769 488 aaKnown RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 KCNS3Q9BQ31 491 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 TUBA1CQ9BQE3 449 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 AARSD1Q9BTE6 412 aaKnown RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 TEX12Q9BXU0 123 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 AGPAT4Q9NRZ5 378 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CRNNQ9UBG3 495 aaPredicted RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 ERGIC3Q9Y282 383 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 HS3ST4Q9Y661 456 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 PRRC2BQ5JSZ5 2229 aaKnown RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 PRRG1O14668 218 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 MYL12BO14950 172 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 BCAS1O75363 584 aaPredicted RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 FABP3P05413 133 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CD1DP15813 335 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 ALDH3B2P48448 385 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CREB5Q02930 508 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 NHSL2Q5HYW2 709 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 ST13P5Q8NFI4 369 aaPredicted RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 SLC2A13Q96QE2 648 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 CXCL16Q9H2A7 254 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 RAI2Q9Y5P3 530 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 S1PR4O95977 384 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 EIF2S1P05198 315 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 ALDOCP09972 364 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 OGNP20774 298 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 GPX3P22352 226 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 ITPKAP23677 461 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 ACVRL1P37023 503 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 CDC42P60953 191 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 OR4D1Q15615 310 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 SLC36A3Q495N2 470 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 THOC7Q6I9Y2 204 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 ANKRD26P1Q6NSI1 321 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 KLHL17Q6TDP4 642 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 COLGALT2Q8IYK4 626 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 CLIP4Q8N3C7 705 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 MFSD2AQ8NA29 543 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 SLC16A10Q8TF71 515 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 SLC30A3Q99726 388 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 PLAC1Q9HBJ0 212 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 PMF1-BGLAPU3KQ54 211 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 CCDC182A6NF36 153 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 STK16O75716 305 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 GPR15P49685 360 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 APLP1P51693 650 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 MLLT6P55198 1093 aaPredicted RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 NCS1P62166 190 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 MRPS6P82932 125 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 ALDH6A1Q02252 535 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 MXD1Q05195 221 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 BCL2L1Q07817 233 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 CD47Q08722 323 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 ZNF57Q68EA5 555 aaPredicted RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 Q6ZNX1 250 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 LARP4Q71RC2 724 aaKnown RBP eCLIP10.36□□□□□ -0.75
USB1-212ENST00000566082 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 SLC34A3Q8N130 599 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 OR4F6Q8NGB9 312 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 TBC1D15Q8TC07 691 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 PHF10Q8WUB8 498 aaKnown RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 KIAA1191Q96A73 305 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 PTERQ96BW5 349 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 ACBD6Q9BR61 282 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 EBPLQ9BY08 206 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 C1orf109Q9NX04 203 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 TOR4AQ9NXH8 423 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 HTR3EA5X5Y0 456 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 ARL5CA6NH57 179 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 FAM220BPB1ANY3 271 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 IFRD1O00458 451 aaPredicted RBP10.36□□□□□ -0.75
USB1-212ENST00000566082 MAFKO60675 156 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 IFNA14P01570 189 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 MATN1P21941 496 aa10.36□□□□□ -0.75
USB1-212ENST00000566082 HOXD12P35452 270 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms