RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 PRR19A6NJB7 356 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 NOBOXO60393 691 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 BRAFP15056 766 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 FDXRP22570 491 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 PPM1FP49593 454 aaPredicted RBP14.64□□□□□ -0.07
NUP54-213ENST00000513352 SERPINB9P50453 376 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 CLCN7P51798 805 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 LIMK1P53667 647 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 POU4F1Q01851 419 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 ZNF460Q14592 562 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 ZNF658BQ4V348 819 aaPredicted RBP14.64□□□□□ -0.07
NUP54-213ENST00000513352 C14orf28Q4W4Y0 310 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 ACSBG2Q5FVE4 666 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 AGAP9Q5VTM2 703 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 DUS1LQ6P1R4 473 aaKnown RBP14.64□□□□□ -0.07
NUP54-213ENST00000513352 IYDQ6PHW0 289 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 WASH2PQ6VEQ5 465 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 RAPH1Q70E73 1250 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 PDZD3Q86UT5 571 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 VRK3Q8IV63 474 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 SPNS2Q8IVW8 549 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 CPNE9Q8IYJ1 553 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 GIMAP7Q8NHV1 300 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 SLC37A2Q8TED4 501 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 DCAKDQ8WVC6 231 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 INPP5DQ92835 1189 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 APOLD1Q96LR9 279 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 GPR22Q99680 433 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 WASH6PQ9NQA3 447 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 PADI4Q9UM07 663 aa14.64□□□□□ -0.07
NUP54-213ENST00000513352 DMDP11532 3685 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 KIR2DS5A0A0G2JLQ3 304 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 A0A0G2JNG1 304 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 A6NCN8 305 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 OR5K4A6NMS3 321 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 RHPN2P1A8MT19 583 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 KIR2DS3K7RE56 304 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 GPC4O75487 556 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 KRT38O76015 456 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 VIPP01282 170 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 MTHFD1P11586 935 aaKnown RBP14.63□□□□□ -0.07
NUP54-213ENST00000513352 SKIV2L2P42285 1042 aaKnown RBP14.63□□□□□ -0.07
NUP54-213ENST00000513352 SLCO1A2P46721 670 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 RGS4P49798 205 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 TAS2R39P59534 338 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 HHEXQ03014 270 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 ABRQ12979 859 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 KIR2DS5Q14953 304 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 CLCA4Q14CN2 919 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 RPE65Q16518 533 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 CCDC157Q569K6 752 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 PAQR3Q6TCH7 311 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 ABRAXAS1Q6UWZ7 409 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 XKR5Q6UX68 686 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 SLC9B2Q86UD5 537 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 SLC22A15Q8IZD6 547 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 MREGQ8N565 214 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 DEFB124Q8NES8 71 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 GPR156Q8NFN8 814 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 OR2W6PQ8NHA6 318 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 LINGO1Q96FE5 620 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 FOPNLQ96NB1 174 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 INSM2Q96T92 566 aaPredicted RBP14.63□□□□□ -0.07
NUP54-213ENST00000513352 MCMBPQ9BTE3 642 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 OR52A5Q9H2C5 316 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 SLC32A1Q9H598 525 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 LATS2Q9NRM7 1088 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 ARGLU1Q9NWB6 273 aaPredicted RBP14.63□□□□□ -0.07
NUP54-213ENST00000513352 NCKIPSDQ9NZQ3 722 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 PSMC3IPQ9P2W1 217 aaPredicted RBP14.63□□□□□ -0.07
NUP54-213ENST00000513352 PCOLCE2Q9UKZ9 415 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 PLAAQ9Y263 795 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 ASF1AQ9Y294 204 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 MED16Q9Y2X0 877 aa14.63□□□□□ -0.07
NUP54-213ENST00000513352 ZNF292O60281 2723 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 TLDC2A0PJX2 215 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 PHGDHO43175 533 aaKnown RBP14.62□□□□□ -0.07
NUP54-213ENST00000513352 KRT37O76014 449 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 SLCO2B1O94956 709 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 STMN1P16949 149 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 DUSP3P51452 185 aaPredicted RBP14.62□□□□□ -0.07
NUP54-213ENST00000513352 TIAL1Q01085 375 aaKnown RBP eCLIP14.62□□□□□ -0.07
NUP54-213ENST00000513352 PROX2Q3B8N5 592 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 LGSNQ5TDP6 509 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 GUSBP11Q6P575 273 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 OGFOD3Q6PK18 319 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 DBX2Q6ZNG2 339 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 CMC1Q7Z7K0 106 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 CEP97Q8IW35 865 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 MYO1HQ8N1T3 1032 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 SFRP1Q8N474 314 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 ARL14Q8N4G2 192 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 FAM181AQ8N9Y4 354 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 PHC3Q8NDX5 983 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 EPS8L3Q8TE67 593 aaKnown RBP14.62□□□□□ -0.07
NUP54-213ENST00000513352 TFGQ92734 400 aaPredicted RBP14.62□□□□□ -0.07
NUP54-213ENST00000513352 FERD3LQ96RJ6 166 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 CDC6Q99741 560 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 HGH1Q9BTY7 390 aa14.62□□□□□ -0.07
NUP54-213ENST00000513352 GPAMQ9HCL2 828 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms