RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 CDHR5Q9HBB8 845 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GEMIN8Q9NWZ8 242 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 NUFIP1Q9UHK0 495 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 BTBD3Q9Y2F9 522 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 RIIAD1A6NNX1 92 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CENPBD1B2RD01 187 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CXCL8P10145 99 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SDC2P34741 201 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SOAT1P35610 550 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PEX19P40855 299 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 IRF8Q02556 426 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SKIV2LQ15477 1246 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GRAMD1CQ8IYS0 662 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PGAP3Q96FM1 320 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 WDR24Q96S15 920 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 OSMRQ99650 979 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GPATCH1Q9BRR8 931 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ASB8Q9H765 288 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FARSBQ9NSD9 589 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TRIOBPQ9H2D6 2365 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 KPNA3O00505 521 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 CYP11A1P05108 521 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PSKH1P11801 424 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PECAM1P16284 738 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 TSFMP43897 325 aaKnown RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 ACTR1AP61163 376 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PAFAH1B3Q15102 231 aaKnown RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 CMPK2Q5EBM0 449 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 MED27Q6P2C8 311 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 B3GNT6Q6ZMB0 384 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 NUP54Q7Z3B4 507 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 SYNPOQ8N3V7 929 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 RAB2BQ8WUD1 216 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 KAT5Q92993 513 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 SLAMF9Q96A28 289 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 MCRS1Q96EZ8 462 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 AURKBQ96GD4 344 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 CDT1Q9H211 546 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 ATXN3LQ9H3M9 355 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 NLGN3Q9NZ94 848 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 GFRA2O00451 464 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 FPGTO14772 594 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PSIP1O75475 530 aaKnown RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PGK1P00558 417 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 F8A1P23610 371 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 SCNN1BP51168 640 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 IFI35P80217 286 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 COX10Q12887 443 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 GRM2Q14416 872 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 TCTE1Q5JU00 501 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 HACD4Q5VWC8 232 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 LRRN1Q6UXK5 716 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 FGD2Q7Z6J4 655 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 DCUN1D3Q8IWE4 304 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 MNTQ99583 582 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 ZFP14Q9HCL3 533 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PIGVQ9NUD9 493 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 FAM49BQ9NUQ9 324 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 TAS2R8Q9NYW2 309 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 DCTN4Q9UJW0 460 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 CNTN6Q9UQ52 1028 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 TMEM265A0A087WTH1 108 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 VGLL3A8MV65 326 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 H0Y858 1186 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 CBX4O00257 560 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 MAP2K7O14733 419 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 AZIN1O14977 448 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 KMOO15229 486 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 TNFP01375 233 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 MT-ND5P03915 603 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 C4BPAP04003 597 aaKnown RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 FGFR4P22455 802 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 FGFR3P22607 806 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 SHMT2P34897 504 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 CSNK1DP48730 415 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PLIN5Q00G26 463 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 SERTAD2Q14140 314 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 HACD2Q6Y1H2 254 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 GDPGP1Q6ZNW5 385 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 CTU1Q7Z7A3 348 aaKnown RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 SLC9B2Q86UD5 537 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PM20D2Q8IYS1 436 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 OR6Y1Q8NGX8 325 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 ANKRD49Q8WVL7 239 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 RAB39BQ96DA2 213 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 OR52B2Q96RD2 323 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 ACTR6Q9GZN1 396 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 KLHL25Q9H0H3 589 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 WDR55Q9H6Y2 383 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 SGK2Q9HBY8 427 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 BLOC1S4Q9NUP1 217 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 DDX18Q9NVP1 670 aaKnown RBP4.87□□□□□ -1.63
PTPN13-209ENST00000511467 COMMD9Q9P000 198 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 MGAT4AQ9UM21 535 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 NAALADL1Q9UQQ1 740 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 FIS1Q9Y3D6 152 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PCDHB9Q9Y5E1 797 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 PCDHGA4Q9Y5G9 962 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 A0A0U1RQF3 1178 aa4.87□□□□□ -1.63
PTPN13-209ENST00000511467 A0A1W2PPW3 197 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms