RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 CPOQ8IVL8 374 aa4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 CHERPQ8IWX8 916 aaKnown RBP4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 CPXCR1Q8N123 301 aa4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 MAGEC3Q8TD91 643 aa4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 MRPL38Q96DV4 380 aaKnown RBP4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 INTS2Q9H0H0 1204 aaKnown RBP4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 FBRSL1Q9HCM7 1045 aaKnown RBP4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 BPIFA1Q9NP55 256 aa4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 GPR52Q9Y2T5 361 aa4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 SIP14410 1827 aa4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 RIF1Q5UIP0 2472 aaKnown RBP4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 NAV1Q8NEY1 1877 aa4.73□□□□□ -1.65
HMGB3P5-201ENST00000428894 RAD50Q92878 1312 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 FAM186AA6NE01 2351 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 TMEM202A6NGA9 273 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 HMGB1P1B2RPK0 211 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 H3BQ06 376 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 PIP5K1CO60331 668 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 CYC1P08574 325 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 HLA-DOBP13765 273 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 CALRP27797 417 aaKnown RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 DDIT3P35638 169 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 PSMC2P35998 433 aaKnown RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 CCR5P51681 352 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 CRIP2P52943 208 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 PSMC6P62333 389 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 DUSP28Q4G0W2 176 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 KCNT1Q5JUK3 1230 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 LINGO2Q7L985 606 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 SLC26A9Q7LBE3 791 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 DSG4Q86SJ6 1040 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 TDRPQ86YL5 185 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 SLC35F3Q8IY50 421 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 ZBTB2Q8N680 514 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 PRSS33Q8NF86 280 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 DMBX1Q8NFW5 382 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 AFAP1L1Q8TED9 768 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 SLC20A1Q8WUM9 679 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 TMEM255BQ8WV15 326 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 FBXO17Q96EF6 278 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 RIOK1Q9BRS2 568 aaKnown RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 HERPUD2Q9BSE4 406 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 MTG1Q9BT17 334 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 TRMT61BQ9BVS5 477 aaKnown RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 CSTL1Q9H114 145 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 KCNN2Q9H2S1 579 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 SLC38A10Q9HBR0 1119 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 ZNF334Q9HCZ1 680 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 PIH1D3Q9NQM4 214 aaKnown RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 C20orf141Q9NUB4 165 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 ABCF3Q9NUQ8 709 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 BEX4Q9NWD9 120 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 HSPB7Q9UBY9 170 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 MUTYHQ9UIF7 546 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 FBXO9Q9UK97 447 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 RALYQ9UKM9 306 aaKnown RBP4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 MTUS1Q9ULD2 1270 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 RIPK3Q9Y572 518 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 TECTAO75443 2155 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 DCHS1Q96JQ0 3298 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 ASTN1O14525 1302 aa4.72□□□□□ -1.65
HMGB3P5-201ENST00000428894 DMDP11532 3685 aa4.71□□□□□ -1.65
HMGB3P5-201ENST00000428894 CACNA1HO95180 2353 aa4.71□□□□□ -1.65
HMGB3P5-201ENST00000428894 COL4A4P53420 1690 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 CACNA1BQ00975 2339 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 A0A1W2PS18 150 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 ASPDHA6ND91 283 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 TMEM221A6NGB7 291 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 B4DLN1 442 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 F5H6K3 240 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 M0R296 226 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 SLC22A3O75751 556 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 PAK4O96013 591 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 TPM2P07951 284 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 AKR1B1P15121 316 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 MARK3P27448 753 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 FMO5P49326 533 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 CLCNKAP51800 687 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 EFNA5P52803 228 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 MRPL12P52815 198 aaKnown RBP4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 RAD23BP54727 409 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 KLRC3Q07444 240 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 C2orf68Q2NKX9 166 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 SLC45A4Q5BKX6 768 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 SLC9C2Q5TAH2 1124 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 GFRALQ6UXV0 394 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 TMEM219Q86XT9 240 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 EGFL6Q8IUX8 553 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 RPAP2Q8IXW5 612 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 FAM133AQ8N9E0 248 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 BBS10Q8TAM1 723 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 CHURC1Q8WUH1 139 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 ARHGAP45Q92619 1136 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 NDST4Q9H3R1 872 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 RAVER2Q9HCJ3 691 aaKnown RBP4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 KLHL1Q9NR64 748 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 HCN3Q9P1Z3 774 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 NYAP2Q9P242 653 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 ADD3Q9UEY8 706 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms