RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SLC19A1P41440 591 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 HALP42357 657 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 RPA4Q13156 261 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 RPE65Q16518 533 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 EMBQ6PCB8 327 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 CD200R1Q8TD46 325 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 C12orf66Q96MD2 445 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 SLC32A1Q9H598 525 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 IMP3Q9NV31 184 aaKnown RBP29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 RP1P56715 2156 aa29.91■■■□□ 2.38
CSNK1E-206ENST00000413574 GIPC1O14908 333 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 TMED2Q15363 201 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 TRIP6Q15654 476 aaKnown RBP29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 ACSBG2Q5FVE4 666 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 GRTP1Q5TC63 336 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 CDC6Q99741 560 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 TAS2R13Q9NYV9 303 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 CPNE7Q9UBL6 633 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 DHRS7Q9Y394 339 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 RNF215Q9Y6U7 377 aa29.9■■■□□ 2.38
CSNK1E-206ENST00000413574 KIR2DS5A0A0G2JLQ3 304 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 A0A0G2JNG1 304 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 KIR2DS3K7RE56 304 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 KPNA5O15131 536 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 PPM1DO15297 605 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 SLCO2B1O94956 709 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 CKMT2P17540 419 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 CSRP1P21291 193 aaKnown RBP29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 RPIAP49247 311 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 KIR2DS5Q14953 304 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 PLEKHS1Q5SXH7 462 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 FAM45BPQ6NSW5 357 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 SLC22A15Q8IZD6 547 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 FAM45AQ8TCE6 357 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 PAFAH2Q99487 392 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 CAB39LQ9H9S4 337 aa29.89■■■□□ 2.38
CSNK1E-206ENST00000413574 OR5K4A6NMS3 321 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 SLC2A4P14672 509 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 FDXRP22570 491 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 HSD17B3P37058 310 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 LIMK2P53671 638 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 TAS2R39P59534 338 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 UBE2IP63279 158 aaKnown RBP29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 KLHL38Q2WGJ6 581 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 PDZD3Q86UT5 571 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 ZNF761Q86XN6 746 aaPredicted RBP29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 SLC44A1Q8WWI5 657 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 CAVIN3Q969G5 261 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 LRIT1Q9P2V4 623 aa29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 TRMT6Q9UJA5 497 aaKnown RBP29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 RUVBL2Q9Y230 463 aaKnown RBP29.89■■■□□ 2.37
CSNK1E-206ENST00000413574 SPAARA0A1B0GVQ0 90 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 EXOC1LA0A1B0GW35 172 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 DCDC2BA2VCK2 349 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 EME2A4GXA9 379 aaPredicted RBP29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 TNFSF14O43557 240 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 TUBBP07437 444 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 XRCC1P18887 633 aaPredicted RBP29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 HOXD11P31277 338 aaPredicted RBP29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 SPRP35270 261 aaPredicted RBP29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 GBX1Q14549 363 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 ZNF460Q14592 562 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 PERM1Q5SV97 790 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 CPNE9Q8IYJ1 553 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 PHC3Q8NDX5 983 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 INPP5DQ92835 1189 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 CXorf40BQ96DE9 158 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 NCKIPSDQ9NZQ3 722 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 SLC39A10Q9ULF5 831 aa29.88■■■□□ 2.37
CSNK1E-206ENST00000413574 CASC3O15234 703 aaKnown RBP29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 SHBGP04278 402 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 MTHFD1P11586 935 aaKnown RBP29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 ACADLP28330 430 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 PLOD1Q02809 727 aaPredicted RBP29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 HHEXQ03014 270 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 ABRQ12979 859 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 CCDC157Q569K6 752 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 PAQR3Q6TCH7 311 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 EFL1Q7Z2Z2 1120 aaKnown RBP29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 SLC9B2Q86UD5 537 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 CEP97Q8IW35 865 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 TRIM48Q8IWZ4 208 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 GPR22Q99680 433 aa29.87■■■□□ 2.37
CSNK1E-206ENST00000413574 CNOT1A5YKK6 2376 aaKnown RBP29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 IFRD1O00458 451 aaPredicted RBP29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 ITGA2BP08514 1039 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 GLB1P16278 677 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 GCAP28676 217 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 NOVA1P51513 510 aaKnown RBP29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 BIRC2Q13490 618 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 BMPR2Q13873 1038 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 IFI44Q8TCB0 444 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 SKA2Q8WVK7 121 aaPredicted RBP29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 TFGQ92734 400 aaPredicted RBP29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 CCDC74AQ96AQ1 378 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 RTKNQ9BST9 563 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 TOR4AQ9NXH8 423 aa29.86■■■□□ 2.37
CSNK1E-206ENST00000413574 HMX2A2RU54 273 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 VIPP01282 170 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 ACP1P24666 158 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms