RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SERPINB12Q96P63 405 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 INSM2Q96T92 566 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 TTC1Q99614 292 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 CCM2Q9BSQ5 444 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 KIFC1Q9BW19 673 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 EPB41L1Q9H4G0 881 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 MRM3Q9HC36 420 aaKnown RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 XAB2Q9HCS7 855 aaKnown RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 SLC40A1Q9NP59 571 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 OGFRQ9NZT2 677 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 SAMD15Q9P1V8 674 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 ANAPC5Q9UJX4 755 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 ACSL5Q9ULC5 683 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 SOX13Q9UN79 622 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 C17orf113A0A1B0GUU1 675 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 CDRT15L2A8MXV6 281 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 QSOX1O00391 747 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 HGSO14964 777 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-204ENST00000547517 FTH1P02794 183 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 AMD1P17707 334 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 ITGB6P18564 788 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 EIF2S3P41091 472 aaKnown RBP11.56□□□□□ -0.56
RAB5C-204ENST00000547517 ETV5P41161 510 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 CAPZBP47756 277 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 MAPK10P53779 464 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 GFERP55789 205 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 TRA2AQ13595 282 aaKnown RBP eCLIP11.56□□□□□ -0.56
RAB5C-204ENST00000547517 PTK6Q13882 451 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 BOP1Q14137 746 aaKnown RBP11.56□□□□□ -0.56
RAB5C-204ENST00000547517 ZNF658BQ4V348 819 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-204ENST00000547517 SYTL3Q4VX76 610 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 CERS6Q6ZMG9 384 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 FAM129CQ86XR2 697 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 PPIL6Q8IXY8 311 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 NAT8LQ8N9F0 302 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 MCUQ8NE86 351 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 ELMO1Q92556 727 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 SGSM3Q96HU1 749 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 TGM7Q96PF1 710 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 TRIM56Q9BRZ2 755 aaKnown RBP11.56□□□□□ -0.56
RAB5C-204ENST00000547517 KCND1Q9NSA2 647 aa11.56□□□□□ -0.56
RAB5C-204ENST00000547517 MN1Q10571 1320 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-204ENST00000547517 ACACAQ13085 2346 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 A0A087WV48 116 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 GOLGA8KD6RF30 607 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 GOLGA8TH3BQL2 631 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 IFRD1O00458 451 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 CD3EAPO15446 510 aaKnown RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 RRP8O43159 456 aaKnown RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 VAPBO95292 243 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 GSTM1P09488 218 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 OR56A5P0C7T3 313 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 MLNP12872 115 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 CCL4P13236 92 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 ARNTP27540 789 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 PDHA2P29803 388 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 CSTF2P33240 577 aaKnown RBP eCLIP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 PPARGP37231 505 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 MLLT3P42568 568 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 PAFAH1B1P43034 410 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 PTGIRP43119 386 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 TTPAP49638 278 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 DR1Q01658 176 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 GSTM4Q03013 218 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 KRT33BQ14525 404 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 BRD3Q15059 726 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 RNASEH2BQ5TBB1 312 aaKnown RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 CAPRIN2Q6IMN6 1127 aaKnown RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 ZNF449Q6P9G9 518 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 C19orf48Q6RUI8 117 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 NAPRTQ6XQN6 538 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 CLEC14AQ86T13 490 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 PLXDC1Q8IUK5 500 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 AGBL5Q8NDL9 886 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 ZNF248Q8NDW4 579 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 LKAAEAR1Q8TD35 194 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 HNRNPLLQ8WVV9 542 aaKnown RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 SLCO2A1Q92959 643 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 ZNF669Q96BR6 464 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-204ENST00000547517 RUNDC3BQ96NL0 473 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 OR52A5Q9H2C5 316 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 IL1RAPL1Q9NZN1 696 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 PCYOX1Q9UHG3 505 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 MAD1L1Q9Y6D9 718 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 CHD6Q8TD26 2715 aa11.55□□□□□ -0.56
RAB5C-204ENST00000547517 UBA6A0AVT1 1052 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 SDR42E2A6NKP2 422 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 EFCAB7A8K855 629 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 IQCF5A8MTL0 148 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 F8W8V4 182 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 LIN7AO14910 233 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 CAPN5O15484 640 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 PRAMEF10O60809 474 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 RASSF9O75901 435 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 PAMP19021 973 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 ITPKBP27987 946 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 CASQ1P31415 396 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 SLC5A2P31639 672 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 MAGEA3P43357 314 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms